RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FGF18O76093 207 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 PDE8BO95263 885 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 VNN1O95497 513 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 SRGAP2BP0DMP2 458 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 TM4SF4P48230 202 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 COPAP53621 1224 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 BCAT1P54687 386 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 CHAF1AQ13111 956 aaPredicted RBP3.84□□□□□ -1.79
PSPC1-205ENST00000497722 RNASE12Q5GAN4 147 aaKnown RBP3.84□□□□□ -1.79
PSPC1-205ENST00000497722 L1TD1Q5T7N2 865 aaKnown RBP3.84□□□□□ -1.79
PSPC1-205ENST00000497722 PGBD2Q6P3X8 592 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 C11orf44Q8N8P7 122 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 ABHD11Q8NFV4 315 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 ZNF398Q8TD17 642 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 ABHD5Q8WTS1 349 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 TRIM63Q969Q1 353 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 SGCZQ96LD1 299 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 PLCB1Q9NQ66 1216 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 ASIC5Q9NY37 505 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 NKX1-2Q9UD57 310 aaPredicted RBP3.84□□□□□ -1.79
PSPC1-205ENST00000497722 STEAP1Q9UHE8 339 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 CDC23Q9UJX2 597 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 A0A1W2PPC4 97 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 FAM234BA2RU67 622 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 CLCA1A8K7I4 914 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 POC1B-GALNT4F8VUJ3 575 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 EXOC5O00471 708 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 HNRNPDLO14979 420 aaKnown RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ZSCAN9O15535 394 aaPredicted RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 BCAR3O75815 825 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 NDST3O95803 873 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 A1BGP04217 495 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 CREB1P16220 341 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 RBL1P28749 1068 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 NTSR1P30989 418 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 UQCRC1P31930 480 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 PTGER1P34995 402 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 HTRA4P83105 476 aaPredicted RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 TNFAIP2Q03169 654 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ELF2Q15723 593 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 SLC35G1Q2M3R5 365 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 MRNIPQ6NTE8 343 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 SLC2A7Q6PXP3 512 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 USP17L6PQ6QN14 398 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 DPY19L3Q6ZPD9 716 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 KRT28Q7Z3Y7 464 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 GALNT4Q8N4A0 578 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ENAHQ8N8S7 591 aaPredicted RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 TERB1Q8NA31 727 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 PNLDC1Q8NA58 520 aaKnown RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ZNF527Q8NB42 609 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 CTHRC1Q96CG8 243 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 C5orf34Q96MH7 638 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 PRR25Q96S07 402 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 VN1R3Q9BXE9 311 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 TRIM5Q9C035 493 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 PCDHAC1Q9H158 963 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ZBTB26Q9HCK0 441 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 NRIP3Q9NQ35 241 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 SNX15Q9NRS6 342 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 SLC52A1Q9NWF4 448 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 SLC39A10Q9ULF5 831 aa3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ZMYND8Q9ULU4 1186 aaPredicted RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 ARID4BQ4LE39 1312 aaPredicted RBP3.83□□□□□ -1.8
PSPC1-205ENST00000497722 E5RJQ4 531 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 PPEF2O14830 753 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 LDHAP00338 332 aaKnown RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 CHRM5P08912 532 aaPredicted RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 CYP2A6P11509 494 aaPredicted RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 FPR3P25089 353 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 PPM1AP35813 382 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 HSPA7P48741 367 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 RENBPP51606 427 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 PSG6Q00889 435 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 E2F1Q01094 437 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 TRIM14Q14142 442 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 NPY5RQ15761 445 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 ST3GAL2Q16842 350 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 SERPINA13PQ6UXR4 307 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 BCDIN3DQ7Z5W3 292 aaKnown RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 CCDC28AQ8IWP9 274 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 RNF152Q8N8N0 203 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 ZBTB9Q96C00 473 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 DAZAP1Q96EP5 407 aaKnown RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 HS6ST2Q96MM7 605 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 FCRL4Q96PJ5 515 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 TMEM79Q9BSE2 394 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 SPRTNQ9H040 489 aaPredicted RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 PDGFCQ9NRA1 345 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 FNIP2Q9P278 1114 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 DKK4Q9UBT3 224 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 RGS17Q9UGC6 210 aaPredicted RBP3.82□□□□□ -1.8
PSPC1-205ENST00000497722 AMFRQ9UKV5 643 aa3.82□□□□□ -1.8
PSPC1-205ENST00000497722 WDR17Q8IZU2 1322 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 ZNF521Q96K83 1311 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 FCHO1O14526 889 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 FFAR2O15552 330 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 EXOC3O60645 756 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 SKAP2O75563 359 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms