RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 DEUP1Q05D60 604 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 TRIP13Q15645 432 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ANKRD20A8PQ5CZ79 823 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PPP6R3Q5H9R7 873 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 SCN4BQ8IWT1 228 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 SLC7A14Q8TBB6 771 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 FBXO25Q8TCJ0 367 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ZNF670Q9BS34 389 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 FRMD8P1Q9BZ68 369 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 DHX35Q9H5Z1 703 aaKnown RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PIGVQ9NUD9 493 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ASIC3Q9UHC3 531 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 FZD10Q9ULW2 581 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 SYNJ2BP-COX16A0A087WUM0 186 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ZNF487B1APH4 448 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 TBC1D4O60343 1298 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 EFEMP2O95967 443 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ITGAVP06756 1048 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PECAM1P16284 738 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 KLRC2P26717 231 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 NME3Q13232 169 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 TFDP2Q14188 446 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 BSPRYQ5W0U4 402 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 VSTM1Q6UX27 236 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 GSTA5Q7RTV2 222 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 KRT222Q8N1A0 295 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ALLCQ8N6M5 410 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PQLC3Q8N755 202 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PCDH19Q8TAB3 1148 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 EDEM1Q92611 657 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ART4Q93070 314 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ZBTB9Q96C00 473 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 FAF2Q96CS3 445 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PGLYRP2Q96PD5 576 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 FMO2Q99518 471 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 COX16Q9P0S2 106 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PCDH10Q9P2E7 1040 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 PCDHB5Q9Y5E4 795 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 MKI67P46013 3256 aaKnown RBP17.04■□□□□ 0.32
HLA-A-208ENST00000496081 TP73O15350 636 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
HLA-A-208ENST00000496081 KRT14P02533 472 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 RAG1P15918 1043 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 HSPA9P38646 679 aaKnown RBP17.04■□□□□ 0.32
HLA-A-208ENST00000496081 DEFB103AP81534 67 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 PRUNE1Q86TP1 453 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 ATAD1Q8NBU5 361 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 ZNF689Q96CS4 500 aaPredicted RBP17.04■□□□□ 0.32
HLA-A-208ENST00000496081 PGAP3Q96FM1 320 aaPredicted RBP17.04■□□□□ 0.32
HLA-A-208ENST00000496081 KCTD15Q96SI1 283 aaPredicted RBP17.04■□□□□ 0.32
HLA-A-208ENST00000496081 TMEM121Q9BTD3 319 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 RRN3Q9NYV6 651 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 WHRNQ9P202 907 aa17.04■□□□□ 0.32
HLA-A-208ENST00000496081 H7C4K7 107 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 ITIH2P19823 946 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 MAGEA11P43364 429 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 GPR15P49685 360 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 ARPP19P56211 112 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 IFRD2Q12894 506 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-208ENST00000496081 DDR2Q16832 855 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 SLC9A4Q6AI14 798 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 MFSD5Q6N075 450 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 NPNTQ6UXI9 565 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 ANKS3Q6ZW76 656 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 PSTKQ8IV42 348 aaKnown RBP17.03■□□□□ 0.32
HLA-A-208ENST00000496081 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 PLD5Q8N7P1 536 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 CCDC89Q8N998 374 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 GLIS1Q8NBF1 620 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-208ENST00000496081 SNF8Q96H20 258 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 C8orf48Q96LL4 319 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 ACBD3Q9H3P7 528 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
HLA-A-208ENST00000496081 TMPRSS4Q9NRS4 437 aa17.03■□□□□ 0.32
HLA-A-208ENST00000496081 AMHP03971 560 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 CPB1P15086 417 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 ADCY8P40145 1251 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 VPS41P49754 854 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 CALCOCO2Q13137 446 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 GPR17Q13304 367 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 NOMO1Q15155 1222 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 SDHAF4Q5VUM1 108 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 FAM117BQ6P1L5 589 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 PRSS55Q6UWB4 352 aaPredicted RBP17.02■□□□□ 0.32
HLA-A-208ENST00000496081 BEND5Q7L4P6 421 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 TTC9BQ8N6N2 239 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 P3H4Q92791 437 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 IGSF21Q96ID5 467 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 SLC9A7Q96T83 725 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 VN1R3Q9BXE9 311 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 C10orf88Q9H8K7 445 aa17.02■□□□□ 0.32
HLA-A-208ENST00000496081 RC3H2Q9HBD1 1191 aaKnown RBP17.02■□□□□ 0.32
HLA-A-208ENST00000496081 MTMR11A4FU01 709 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms