RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 TDRD12Q587J7 1177 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 PPP1R2P3Q6NXS1 205 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 FAM183BPQ6ZVS7 135 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 BHLHA9Q7RTU4 235 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 VPS36Q86VN1 386 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 CPA6Q8N4T0 437 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 SYN2Q92777 582 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 HAUS4Q9H6D7 363 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 TRPV5Q9NQA5 729 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 WNT6Q9Y6F9 365 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 FAM170AA1A519 330 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 HSF2BPO75031 334 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 NFATC1O95644 943 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 GYPCP04921 128 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 HMBSP08397 361 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 CASP14P31944 242 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 GABRB2P47870 512 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 HARS2P49590 506 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 ZXDBP98169 803 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 SLC6A3Q01959 620 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 PRKCQQ04759 706 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 RUNX3Q13761 415 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 MLF2Q15773 248 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 CLEC16AQ2KHT3 1053 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 ITPRIPL2Q3MIP1 535 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 TRIM68Q6AZZ1 485 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 C1orf228Q6PIY5 440 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 HFE2Q6ZVN8 426 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 VSTM4Q8IW00 320 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 SLC30A5Q8TAD4 765 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 PBXIP1Q96AQ6 731 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 ZFRQ96KR1 1074 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 FAM83CQ9BQN1 747 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 DCLK3Q9C098 648 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 C8orf33Q9H7E9 229 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 HEBP1Q9NRV9 189 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 SFMBT1Q9UHJ3 866 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 ZNF510Q9Y2H8 683 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 HBS1LQ9Y450 684 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 PIAS3Q9Y6X2 628 aa12.63□□□□□ -0.39
CSNK1E-213ENST00000495232 TICRRQ7Z2Z1 1910 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 MAN2B1O00754 1011 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 SCAMP3O14828 347 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 SERPING1P05155 500 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 SKILP12757 684 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 GLULP15104 373 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 PRKCIP41743 596 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 CDK17Q00537 523 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 TNK2Q07912 1038 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 TMEM31Q5JXX7 168 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 FAM102AQ5T9C2 384 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 MSANTD2Q6P1R3 559 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 ZNF852Q6ZMS4 543 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 TPRG1Q6ZUI0 275 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 HTR3DQ70Z44 454 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 FLCNQ8NFG4 579 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 PLD4Q96BZ4 506 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 ASIC4Q96FT7 647 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 MSANTD3Q96H12 275 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 SERPINB11Q96P15 392 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 ADAM22Q9P0K1 906 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 NAALADL1Q9UQQ1 740 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 CUL9Q8IWT3 2517 aa12.62□□□□□ -0.39
CSNK1E-213ENST00000495232 KRBA1A5PL33 1030 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 FAM86C2PA6NEL3 165 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 TMCO5BA8MYB1 307 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 ARNTLO00327 626 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 GRAP2O75791 330 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 STC2O76061 302 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 CALB1P05937 261 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 ARSAP15289 507 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 MMP8P22894 467 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 CORO1AP31146 461 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 GBP1P32455 592 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 MLLT6P55198 1093 aaPredicted RBP12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 CENPCQ03188 943 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 TAF5Q15542 800 aa12.61□□□□□ -0.39
CSNK1E-213ENST00000495232 EML3Q32P44 896 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms