RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ARHGAP26Q9UNA1 814 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 LEFTY2O00292 366 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 CAPN9O14815 690 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 MSI1O43347 362 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 GZMAP12544 262 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 RRM1P23921 792 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 PITX1P78337 314 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ASTE1Q2TB18 679 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 DCAF6Q58WW2 860 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 EFHC1Q5JVL4 640 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 SLC26A9Q7LBE3 791 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ZDHHC17Q8IUH5 632 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 DEFB106AQ8N104 65 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 SLC44A3Q8N4M1 653 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 CELF5Q8N6W0 485 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ELSPBP1Q96BH3 223 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 METTL5Q9NRN9 209 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 MARCH2Q9P0N8 246 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 CFAP97Q9P2B7 532 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 IMPACTQ9P2X3 320 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 AKR1B10O60218 316 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 HSF2BPO75031 334 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 RTN2O75298 545 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ECI2O75521 394 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 CALB1P05937 261 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 PFKLP17858 780 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ABCB4P21439 1286 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 WEE1P30291 646 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ZNF268Q14587 947 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 CCDC122Q5T0U0 273 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ALKBH5Q6P6C2 394 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 KLHDC10Q6PID8 442 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 EMC1Q8N766 993 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 ZFYVE19Q96K21 471 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 CCDC42Q96M95 316 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 PANX2Q96RD6 677 aa18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 KLF16Q9BXK1 252 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-208ENST00000493815 SSU72P8A0A1W2PR75 194 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 SLC12A8A0AV02 714 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 NARSO43776 548 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 CDK17Q00537 523 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 TRNP1Q6NT89 227 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 TADA2BQ86TJ2 420 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 ZNF276Q8N554 614 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 DQX1Q8TE96 717 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 SLC2A13Q96QE2 648 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 CDK5RAP1Q96SZ6 601 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 ISCUQ9H1K1 167 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 IGSF9Q9P2J2 1179 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 MUTYHQ9UIF7 546 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 STRIP2Q9ULQ0 834 aa18.68■□□□□ 0.58
PDLIM7-208ENST00000493815 GLI1P08151 1106 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 TFE3P19532 575 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 FLT3P36888 993 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 ZNF77Q15935 545 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 SLC18A3Q16572 532 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 TAC4Q86UU9 113 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 JOSD2Q8TAC2 188 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 BPIFB1Q8TDL5 484 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 OLA1Q9NTK5 396 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 ASNSD1Q9NWL6 643 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 TMEM59LQ9UK28 342 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 NENFQ9UMX5 172 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 MYO10Q9HD67 2058 aa18.67■□□□□ 0.58
PDLIM7-208ENST00000493815 SYNJ2BP-COX16A0A087WUM0 186 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 SOWAHDA6NJG2 315 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 DAB1O75553 588 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 PSMC3P17980 439 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 USP4Q13107 963 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 DNAJC24Q6P3W2 148 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 MFSD6LQ8IWD5 586 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 C3orf20Q8ND61 904 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 ZNF653Q96CK0 615 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 ASIC4Q96FT7 647 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 SELENOOQ9BVL4 669 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 PACSIN1Q9BY11 444 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 ADAM33Q9BZ11 813 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 THAP2Q9H0W7 228 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 COX16Q9P0S2 106 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 WDR35Q9P2L0 1181 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 MYO1AQ9UBC5 1043 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 NUP210Q8TEM1 1887 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 TCRBV5S1A1TA0A578 114 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 KRT3P12035 628 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 GDI1P31150 447 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 GPC5P78333 572 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 TDGQ13569 410 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 MTF1Q14872 753 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 TRIM68Q6AZZ1 485 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 MSANTD2Q6P1R3 559 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 E2F7Q96AV8 911 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 CFAP57Q96MR6 1250 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 TRIM62Q9BVG3 475 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 TRMT61BQ9BVS5 477 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 KIF9Q9HAQ2 790 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 OBP2AQ9NY56 170 aa18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM7-208ENST00000493815 CALCOCO1Q9P1Z2 691 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms