RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 SPDYCQ5MJ68 293 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 DAB2IPQ5VWQ8 1189 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 FBXL13Q8NEE6 735 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 RLN3Q8WXF3 142 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 FAM124BQ9H5Z6 455 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-208ENST00000493601 ANGPTL2Q9UKU9 493 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 CACNA1BQ00975 2339 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 C4orf47A7E2U8 309 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 KCNK5O95279 499 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 RALAP11233 206 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 HOXB2P14652 356 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 NTSR1P30989 418 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 PLA2G4AP47712 749 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 MCCD1P59942 119 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-208ENST00000493601 PPP1R26Q5T8A7 1209 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-208ENST00000493601 N4BP2L1Q5TBK1 243 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-208ENST00000493601 TPGS1Q6ZTW0 290 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 ZNF276Q8N554 614 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 PIGKQ92643 395 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 HEXIM2Q96MH2 286 aaKnown RBP17.49■□□□□ 0.39
PTPRU-208ENST00000493601 NMUR1Q9HB89 426 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 TMEM9BQ9NQ34 198 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 RMND1Q9NWS8 449 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 EVLQ9UI08 416 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-208ENST00000493601 MBD1Q9UIS9 605 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-208ENST00000493601 CEP192Q8TEP8 1941 aa17.49■□□□□ 0.39
PTPRU-208ENST00000493601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 PATE3B3GLJ2 98 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 MDM4O15151 490 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 CETN3O15182 167 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 ZBTB24O43167 697 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-208ENST00000493601 PMLP29590 882 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 DGKGP49619 791 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 MAP7D1Q3KQU3 841 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 ZNF394Q53GI3 561 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 LYSMD4Q5XG99 296 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 SDE2Q6IQ49 451 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 PSAPL1Q6NUJ1 521 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 Q6ZNB5 142 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 SMYD4Q8IYR2 804 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-208ENST00000493601 TMEFF1Q8IYR6 380 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 CHPFQ8IZ52 775 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 SEMA4DQ92854 862 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 CISHQ9NSE2 258 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 RAB20Q9NX57 234 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 CLIC5Q9NZA1 410 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 NUDT5Q9UKK9 219 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 ZNF510Q9Y2H8 683 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 USP3Q9Y6I4 520 aa17.48■□□□□ 0.39
PTPRU-208ENST00000493601 MAP1BP46821 2468 aaKnown RBP17.48■□□□□ 0.39
PTPRU-208ENST00000493601 TRIM24O15164 1050 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 AP5Z1O43299 807 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 STC2O76061 302 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 GABRG2P18507 467 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 HOXD12P35452 270 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 NOVA1P51513 510 aaKnown RBP17.47■□□□□ 0.39
PTPRU-208ENST00000493601 SLC8A3P57103 927 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 SHC2P98077 582 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 LMAN2Q12907 356 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 EGFLAMQ63HQ2 1017 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 SLC36A4Q6YBV0 504 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 ARMCX6Q7L4S7 300 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 SCD5Q86SK9 330 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 MIB1Q86YT6 1006 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 SYT12Q8IV01 421 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 ARHGAP18Q8N392 663 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 EEF2KMTQ96G04 330 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 TMEM176AQ96HP8 235 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
PTPRU-208ENST00000493601 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
PTPRU-208ENST00000493601 SLC16A3O15427 465 aaKnown RBP17.46■□□□□ 0.39
PTPRU-208ENST00000493601 PTGER3P43115 390 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 RAD23BP54727 409 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 IRX4P78413 519 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 COG7P83436 770 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 RPL6Q02878 288 aaKnown RBP17.46■□□□□ 0.39
PTPRU-208ENST00000493601 PNOCQ13519 176 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 TRIM61Q5EBN2 209 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 FRMD1Q8N878 549 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 SLC4A11Q8NBS3 891 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 BHMTQ93088 406 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 TSG101Q99816 390 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 ARID3AQ99856 593 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 GABRG3Q99928 467 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 UBXN6Q9BZV1 441 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 RASAL2Q9UJF2 1139 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 HCN2Q9UL51 889 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 CEP295Q9C0D2 2601 aa17.46■□□□□ 0.39
PTPRU-208ENST00000493601 A0A1W2PQF6 199 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 ZNF217O75362 1048 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 CHKAP35790 457 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 WASP42768 502 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 ST3GAL2Q16842 350 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 COBLL1Q53SF7 1204 aa17.45■□□□□ 0.38
PTPRU-208ENST00000493601 DCAF17Q5H9S7 520 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-208ENST00000493601 TCERG1LQ5VWI1 586 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms