RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 TPM3P06753 285 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 CD72P21854 359 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 CTHP32929 405 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 SOX9P48436 509 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 CLCN5P51795 746 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 MLLT6P55198 1093 aaPredicted RBP13.38□□□□□ -0.27
CLIP2-209ENST00000493166 COG7P83436 770 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 CDR2Q01850 454 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 RALGPS2Q86X27 583 aaPredicted RBP13.38□□□□□ -0.27
CLIP2-209ENST00000493166 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 PJA1Q8NG27 643 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 SLC20A1Q8WUM9 679 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 FAM3CQ92520 227 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 DDX23Q9BUQ8 820 aaKnown RBP13.38□□□□□ -0.27
CLIP2-209ENST00000493166 TRIM62Q9BVG3 475 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 LINC00597Q9H2U6 94 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 TBC1D14Q9P2M4 693 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 TJP2Q9UDY2 1190 aa13.38□□□□□ -0.27
CLIP2-209ENST00000493166 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
CLIP2-209ENST00000493166 F5P12259 2224 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 ATG2BQ96BY7 2078 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 SLC12A8A0AV02 714 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 OTOL1A6NHN0 477 aaPredicted RBP13.37□□□□□ -0.27
CLIP2-209ENST00000493166 STC2O76061 302 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 HMBSP08397 361 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 NCAM1P13591 858 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 FERP16591 822 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 AOC1P19801 751 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 CDH5P33151 784 aaPredicted RBP13.37□□□□□ -0.27
CLIP2-209ENST00000493166 VCPP55072 806 aaKnown RBP13.37□□□□□ -0.27
CLIP2-209ENST00000493166 NR1H3Q13133 447 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 PTPN20Q4JDL3 420 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 BBS7Q8IWZ6 715 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 BAP1Q92560 729 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 WBP2Q969T9 261 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 LTB4R2Q9NPC1 389 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 SFMBT1Q9UHJ3 866 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
CLIP2-209ENST00000493166 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
CLIP2-209ENST00000493166 FAM170AA1A519 330 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 LRRC53A6NM62 1247 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 FAM170BA6NMN3 283 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 CAPN9O14815 690 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 CBFA2T2O43439 604 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 ERBB2P04626 1255 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
CLIP2-209ENST00000493166 PBX1P40424 430 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 NOMO3P69849 1222 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 AMPD2Q01433 879 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 FMO1Q01740 532 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 ASIC2Q16515 512 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 FIGNQ5HY92 759 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 NAA35Q5VZE5 725 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 OR6B2Q6IFH4 312 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 MSANTD2Q6P1R3 559 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 FAM183BPQ6ZVS7 135 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 HTR3DQ70Z44 454 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 TMEM105Q8N8V8 129 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 CPA5Q8WXQ8 436 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 PLD4Q96BZ4 506 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 NELL2Q99435 816 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
CLIP2-209ENST00000493166 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
CLIP2-209ENST00000493166 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
CLIP2-209ENST00000493166 SHISA7A6NL88 538 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 NCAM2O15394 837 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 PI15O43692 258 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 HSF2BPO75031 334 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 ADH1CP00326 375 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 CYP17A1P05093 508 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 FYNP06241 537 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 DCNP07585 359 aaKnown RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 CHRNB2P17787 502 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 AVPR2P30518 371 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 GJA4P35212 333 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 YWHAZP63104 245 aaKnown RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 PON2Q15165 354 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 DHCR24Q15392 516 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 EFHC1Q5JVL4 640 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 SFMBT2Q5VUG0 894 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 TXNDC11Q6PKC3 985 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 OLFML1Q6UWY5 402 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 BEND5Q7L4P6 421 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 ZDHHC17Q8IUH5 632 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 CCDC105Q8IYK2 499 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 ADGRG2Q8IZP9 1017 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms