RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SYNJ2BP-COX16A0A087WUM0 186 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 GOLGA6CA6NDK9 693 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 OR6C75A6NL08 312 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 YJEFN3A6XGL0 299 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 TBKBP1A7MCY6 615 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 E7ENQ6 273 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 H3BRJ5 948 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 OAZ2O95190 189 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 IFNB1P01574 187 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 ZSCAN5DPP0CG00 497 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 GOLGA6DP0CG33 693 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 RBP3P10745 1247 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 RARGP13631 454 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 L1CAMP32004 1257 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 ARL4AP40617 200 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC11A1P49279 550 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 MNX1P50219 401 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 AIF1P55008 147 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 EIF3BP55884 814 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 BCAR1P56945 870 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PITX1P78337 314 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 TLE2Q04725 743 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 FAAP100Q0VG06 881 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 ELAVL2Q12926 359 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 GPS1Q13098 491 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 NFE2Q16621 373 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 P3H1Q32P28 736 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC39A12Q504Y0 691 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 EFHC2Q5JST6 749 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 CEP85LQ5SZL2 805 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 ZNF280DQ6N043 979 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 HIBCHQ6NVY1 386 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 C1orf228Q6PIY5 440 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 NPNTQ6UXI9 565 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 TRMT10CQ7L0Y3 403 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 BHLHA9Q7RTU4 235 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PRUNE1Q86TP1 453 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 LRRTM3Q86VH5 581 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 CCDC25Q86WR0 208 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 FAM131BQ86XD5 332 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 LRRC43Q8N309 656 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PQLC3Q8N755 202 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PCDH19Q8TAB3 1148 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 NTAN1Q96AB6 310 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 FUBP3Q96I24 572 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 ZNF333Q96JL9 665 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PKNOX2Q96KN3 472 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 TOX2Q96NM4 488 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC9A7Q96T83 725 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 TMEM121Q9BTD3 319 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PABPC3Q9H361 631 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 FAM204AQ9H8W3 233 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 PRDM16Q9HAZ2 1276 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 MARCH5Q9NX47 278 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 GOLGA6AQ9NYA3 693 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 COX16Q9P0S2 106 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 CALCOCO1Q9P1Z2 691 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 SAE1Q9UBE0 346 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 NAALADL1Q9UQQ1 740 aa9.51□□□□□ -0.89
SMARCC1-208ENST00000492896 CFAP69A5D8W1 941 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 H0YGN5 161 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 H7C0C1 242 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 TRIM66O15016 1216 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 TP73O15350 636 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 F9P00740 461 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 FYNP06241 537 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 NUDT17P0C025 328 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 OR4Q2P0C623 313 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 NCAM1P13591 858 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ETS1P14921 441 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 IL4RP24394 825 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CYP2C18P33260 490 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 RFC2P35250 354 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CHKAP35790 457 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 GRIK1P39086 918 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ATP5OP48047 213 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC5A3P53794 718 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ZNF844Q08AG5 666 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 IFFO1Q0D2I5 559 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 NME3Q13232 169 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 MORF4L2Q15014 288 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CTXN3Q4LDR2 81 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 TTMPQ5BVD1 217 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 FAM171A1Q5VUB5 890 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PM20D1Q6GTS8 502 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 FUT10Q6P4F1 479 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CNKSR3Q6P9H4 555 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 DARS2Q6PI48 645 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 FBXO46Q6PJ61 603 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 BEND5Q7L4P6 421 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CTU1Q7Z7A3 348 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 DEFB128Q7Z7B8 93 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PCGF5Q86SE9 256 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 CDKL3Q8IVW4 592 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 ZCCHC9Q8N567 271 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-208ENST00000492896 PLD5Q8N7P1 536 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms