RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 WASP42768 502 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 KLHDC10Q6PID8 442 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 ARMCX6Q7L4S7 300 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 FBXL13Q8NEE6 735 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 TSG101Q99816 390 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 LSM14BQ9BX40 385 aaKnown RBP20.76■□□□□ 0.91
SREBF1-216ENST00000490796 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.76■□□□□ 0.91
SREBF1-216ENST00000490796 OSER1Q9NX31 292 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 NUDT5Q9UKK9 219 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 TM4SF5O14894 197 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 MDM4O15151 490 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 DPP6P42658 865 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 KIF11P52732 1056 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 PPP1R26Q5T8A7 1209 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-216ENST00000490796 N4BP2L1Q5TBK1 243 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-216ENST00000490796 TCERG1LQ5VWI1 586 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 MIB1Q86YT6 1006 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 TMEFF1Q8IYR6 380 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 CHPFQ8IZ52 775 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 EEF2KMTQ96G04 330 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 FAXDC2Q96IV6 333 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 NMUR1Q9HB89 426 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 GDPD2Q9HCC8 539 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 TMEM9BQ9NQ34 198 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 RAB20Q9NX57 234 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 ANGPTL2Q9UKU9 493 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 ZNF510Q9Y2H8 683 aa20.75■□□□□ 0.91
SREBF1-216ENST00000490796 LNP1A1A4G5 178 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 TRIM24O15164 1050 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 CACNG3O60359 315 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 KCNK5O95279 499 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 CCDC186Q7Z3E2 898 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 SMYD4Q8IYR2 804 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-216ENST00000490796 ARHGAP18Q8N392 663 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 NUP205Q92621 2012 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 BHMTQ93088 406 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 NUSAP1Q9BXS6 441 aaKnown RBP20.74■□□□□ 0.91
SREBF1-216ENST00000490796 CISHQ9NSE2 258 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 MARK1Q9P0L2 795 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 RASAL2Q9UJF2 1139 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 STARD13Q9Y3M8 1113 aa20.74■□□□□ 0.91
SREBF1-216ENST00000490796 DGKGP49619 791 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 COG7P83436 770 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 LMAN2Q12907 356 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 ZCWPW2Q504Y3 356 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 DCAF17Q5H9S7 520 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-216ENST00000490796 SPDYCQ5MJ68 293 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 LYSMD4Q5XG99 296 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 EGFLAMQ63HQ2 1017 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 PSAPL1Q6NUJ1 521 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 SLC36A4Q6YBV0 504 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 RSRC2Q7L4I2 434 aaKnown RBP20.73■□□□□ 0.91
SREBF1-216ENST00000490796 TMEM176AQ96HP8 235 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 DCLK3Q9C098 648 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 CLIC5Q9NZA1 410 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 STRIP2Q9ULQ0 834 aa20.73■□□□□ 0.91
SREBF1-216ENST00000490796 PATE3B3GLJ2 98 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 AP5Z1O43299 807 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 GREM1O60565 184 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 SMC2O95347 1197 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 CHRM1P11229 460 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-216ENST00000490796 NOVA1P51513 510 aaKnown RBP20.72■□□□□ 0.91
SREBF1-216ENST00000490796 RPL6Q02878 288 aaKnown RBP20.72■□□□□ 0.91
SREBF1-216ENST00000490796 EFEMP1Q12805 493 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 PNOCQ13519 176 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 MAP7D1Q3KQU3 841 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 UAP1L1Q3KQV9 507 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 TRIM61Q5EBN2 209 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 SYT12Q8IV01 421 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 SEMA4DQ92854 862 aa20.72■□□□□ 0.91
SREBF1-216ENST00000490796 FAM124BQ9H5Z6 455 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-216ENST00000490796 MAP1BP46821 2468 aaKnown RBP20.71■□□□□ 0.91
SREBF1-216ENST00000490796 STC2O76061 302 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 HMBSP08397 361 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 GABRG2P18507 467 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 CHKAP35790 457 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 PTGER3P43115 390 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 YWHAEP62258 255 aaKnown RBP20.71■□□□□ 0.91
SREBF1-216ENST00000490796 IRX4P78413 519 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 SCD5Q86SK9 330 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 ZNF276Q8N554 614 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 FRMD1Q8N878 549 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 SLC4A11Q8NBS3 891 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 PLK2Q9NYY3 685 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 EVLQ9UI08 416 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-216ENST00000490796 MBD1Q9UIS9 605 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-216ENST00000490796 HOOK1Q9UJC3 728 aaKnown RBP20.71■□□□□ 0.91
SREBF1-216ENST00000490796 USP3Q9Y6I4 520 aa20.71■□□□□ 0.91
SREBF1-216ENST00000490796 ZNF217O75362 1048 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 CYBBP04839 570 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 ATXN3P54252 364 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-216ENST00000490796 RAD23BP54727 409 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 ZNF658Q5TYW1 1059 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-216ENST00000490796 Q6ZNB5 142 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 TOGARAM2Q6ZUX3 1019 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 PIGZQ86VD9 579 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 IPO4Q8TEX9 1081 aaKnown RBP20.7■□□□□ 0.9
SREBF1-216ENST00000490796 GSDMAQ96QA5 445 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 GTPBP4Q9BZE4 634 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms