RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 EDEM1Q92611 657 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 MRPS31Q92665 395 aaKnown RBP11.4□□□□□ -0.58
TFF3-203ENST00000489676 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
TFF3-203ENST00000489676 SLC22A12Q96S37 553 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 NPY6RQ99463 290 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 TRIM62Q9BVG3 475 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 ATXN3LQ9H3M9 355 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 SMOC2Q9H3U7 446 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 POMKQ9H5K3 350 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 PIDD1Q9HB75 910 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 MRPL47Q9HD33 250 aaKnown RBP11.4□□□□□ -0.58
TFF3-203ENST00000489676 CALCOCO1Q9P1Z2 691 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 MYO1AQ9UBC5 1043 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 NAALADL1Q9UQQ1 740 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
TFF3-203ENST00000489676 DUSP10Q9Y6W6 482 aa11.4□□□□□ -0.58
TFF3-203ENST00000489676 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 ZNF197O14709 1029 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 PFKLP17858 780 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 KCNA5P22460 613 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 DDX6P26196 483 aaKnown RBP eCLIP11.39□□□□□ -0.59
TFF3-203ENST00000489676 NOS2P35228 1153 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 MTHFRP42898 656 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 ZNF143P52747 638 aaPredicted RBP11.39□□□□□ -0.59
TFF3-203ENST00000489676 SMAD4Q13485 552 aaKnown RBP11.39□□□□□ -0.59
TFF3-203ENST00000489676 TEAD2Q15562 447 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 CLUL1Q15846 466 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 CCDC14Q49A88 953 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 HECTD3Q5T447 861 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 BTBD8Q5XKL5 378 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 TXNDC8Q6A555 127 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 CES5AQ6NT32 575 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 EP400NLQ6ZTU2 488 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 KIAA1328Q86T90 577 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 TAC4Q86UU9 113 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 REXO1L1PQ8IX06 675 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 RHOT2Q8IXI1 618 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 SLC35G2Q8TBE7 412 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 RXFP2Q8WXD0 754 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 PGAP3Q96FM1 320 aaPredicted RBP11.39□□□□□ -0.59
TFF3-203ENST00000489676 RIPOR3Q96MK2 946 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 CFAP57Q96MR6 1250 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 GCNAQ96QF7 691 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
TFF3-203ENST00000489676 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
TFF3-203ENST00000489676 CTTNBP2NLQ9P2B4 639 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 ANAPC7Q9UJX3 599 aa11.39□□□□□ -0.59
TFF3-203ENST00000489676 MRPS23Q9Y3D9 190 aaKnown RBP11.39□□□□□ -0.59
TFF3-203ENST00000489676 USP27XA6NNY8 438 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 MDM4O15151 490 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 IRAK2O43187 625 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 CCP110O43303 1012 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 MBTPS2O43462 519 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ENDOD1O94919 500 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 TBX18O95935 607 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 IGLV3-27P01718 113 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 RALAP11233 206 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 NCAM1P13591 858 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 PDGFRAP16234 1089 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 GPD1P21695 349 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 FSHRP23945 695 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 WEE1P30291 646 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 RNASE9P60153 205 aaKnown RBP11.38□□□□□ -0.59
TFF3-203ENST00000489676 SLC7A9P82251 487 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ZXDBP98169 803 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 KIF5AQ12840 1032 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 NNTQ13423 1086 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
TFF3-203ENST00000489676 SLC25A52Q3SY17 297 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ARHGAP15Q53QZ3 475 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 RAB6CQ53S08 254 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 DCAF6Q58WW2 860 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ATAT1Q5SQI0 421 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 GPR158Q5T848 1215 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 DCUN1D2Q6PH85 259 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 TXLNBQ8N3L3 684 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ARFGAP1Q8N6T3 406 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ING5Q8WYH8 240 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 CENPIQ92674 756 aaPredicted RBP11.38□□□□□ -0.59
TFF3-203ENST00000489676 GOLGA1Q92805 767 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 HLA-CQ95604 372 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 NECTIN4Q96NY8 510 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 CDK5RAP1Q96SZ6 601 aaKnown RBP11.38□□□□□ -0.59
TFF3-203ENST00000489676 TBCBQ99426 244 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 CNPY3Q9BT09 278 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 SLC46A2Q9BY10 475 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 TSGA10Q9BZW7 698 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 RAB6CQ9H0N0 254 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 TASP1Q9H6P5 420 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 OLA1Q9NTK5 396 aaKnown RBP11.38□□□□□ -0.59
TFF3-203ENST00000489676 RRN3Q9NYV6 651 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 ZMYM5Q9UJ78 669 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 NUDT5Q9UKK9 219 aa11.38□□□□□ -0.59
TFF3-203ENST00000489676 CAPN9O14815 690 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 PRAMEF12O95522 483 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms