RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 EDEM1Q92611 657 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 NT5C3BQ969T7 300 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 CNPY3Q9BT09 278 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 SMOC2Q9H3U7 446 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 WDR6Q9NNW5 1121 aaKnown RBP14.51□□□□□ -0.09
C9orf3-221ENST00000489562 OSGEPQ9NPF4 335 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 OSER1Q9NX31 292 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 CD207Q9UJ71 328 aa14.51□□□□□ -0.09
C9orf3-221ENST00000489562 MRPS23Q9Y3D9 190 aaKnown RBP14.51□□□□□ -0.09
C9orf3-221ENST00000489562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 GJB6O95452 261 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 F9P00740 461 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 OAS1P00973 400 aaKnown RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 FSHRP23945 695 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 PSMA2P25787 234 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 GBP1P32455 592 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 ATP5C1P36542 298 aaKnown RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 KPNA1P52294 538 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 NAP1L1P55209 391 aaKnown RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 DLX2Q07687 328 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 NNTQ13423 1086 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 SKIV2LQ15477 1246 aaKnown RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 C10orf120Q5SQS8 335 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 STRADAQ7RTN6 431 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 EMC1Q8N766 993 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 NIPA2Q8N8Q9 360 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 KIAA1524Q8TCG1 905 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 UBE2Q2Q8WVN8 375 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 PGAP3Q96FM1 320 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 SERPINB11Q96P15 392 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 NPY6RQ99463 290 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 NACA2Q9H009 215 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 TASP1Q9H6P5 420 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 UBE2ZQ9H832 354 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-221ENST00000489562 LZTFL1Q9NQ48 299 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 DNMT3LQ9UJW3 386 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 GUCA1BQ9UMX6 200 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 TFR2Q9UP52 801 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 COG5Q9UP83 839 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 NAALADL1Q9UQQ1 740 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 CDH23Q9H251 3354 aa14.5□□□□□ -0.09
C9orf3-221ENST00000489562 TRAV19A0A0A6YYK7 116 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 MACROD2A1Z1Q3 448 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 RNF8O76064 485 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 OLFM2O95897 454 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 MAN1A1P33908 653 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 CCR2P41597 374 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 PGFP49763 221 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 NTHL1P78549 312 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 CYP4F8P98187 520 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 CCDC85BQ15834 202 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-221ENST00000489562 SLC5A9Q2M3M2 681 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 GPR158Q5T848 1215 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 SYPL2Q5VXT5 272 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 TRNP1Q6NT89 227 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 C11orf63Q6NUN7 778 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 REXO1L1PQ8IX06 675 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-221ENST00000489562 DQX1Q8TE96 717 aaKnown RBP14.49□□□□□ -0.09
C9orf3-221ENST00000489562 HLA-CQ95604 372 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 TCEAL4Q96EI5 215 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 CFAP57Q96MR6 1250 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 APOL5Q9BWW9 433 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 CCSER2Q9H7U1 834 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 FAM204AQ9H8W3 233 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 MARCH2Q9P0N8 246 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 PAXBP1Q9Y5B6 917 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 DUSP10Q9Y6W6 482 aa14.49□□□□□ -0.09
C9orf3-221ENST00000489562 C2orf78A6NCI8 922 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 COCHO43405 550 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 MOSPD3O75425 235 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 PROSCO94903 275 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 ENDOD1O94919 500 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TRUB2O95900 331 aaKnown RBP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 IGLV3-25P01717 112 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 HDCP19113 662 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 WEE1P30291 646 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SLC1A1P43005 524 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SULT1E1P49888 294 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SLC7A9P82251 487 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 COG7P83436 770 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 OGDHQ02218 1023 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 EFEMP1Q12805 493 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SMAD4Q13485 552 aaKnown RBP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TEAD2Q15562 447 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 CCDC14Q49A88 953 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TXNDC8Q6A555 127 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 BNIPLQ7Z465 357 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TAC4Q86UU9 113 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SYCE1Q8N0S2 351 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TPCN2Q8NHX9 752 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 CENPIQ92674 756 aaPredicted RBP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 ALS2CR12Q96Q35 445 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 SLITRK6Q9H5Y7 841 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TRPC7Q9HCX4 862 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TRMT1Q9NXH9 659 aaKnown RBP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 GDE1Q9NZC3 331 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 TRIM10Q9UDY6 481 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms