RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 SPTLC3Q9NUV7 552 aa8.67□□□□□ -1.02
SF1-218ENST00000489544 CLIC5Q9NZA1 410 aa8.67□□□□□ -1.02
SF1-218ENST00000489544 MARCH2Q9P0N8 246 aa8.67□□□□□ -1.02
SF1-218ENST00000489544 CFAP97Q9P2B7 532 aa8.67□□□□□ -1.02
SF1-218ENST00000489544 ARHGAP26Q9UNA1 814 aa8.67□□□□□ -1.02
SF1-218ENST00000489544 SYNJ2BP-COX16A0A087WUM0 186 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 SLC12A8A0AV02 714 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 DPYSL4O14531 572 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 CAPN9O14815 690 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ECI2O75521 394 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ABCB4P21439 1286 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 GDI1P31150 447 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 FLT3P36888 993 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 PSEN1P49768 467 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 TUBP50607 506 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ATXN1P54253 815 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 YWHAZP63104 245 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 GPC5P78333 572 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 SLC7A9P82251 487 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 TNK2Q07912 1038 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 MTF1Q14872 753 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ZNF77Q15935 545 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 RAB6CQ53S08 254 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 DCAF6Q58WW2 860 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 CCDC122Q5T0U0 273 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 OTUD1Q5VV17 481 aaPredicted RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 ALKBH5Q6P6C2 394 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 TOGARAM2Q6ZUX3 1019 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 MTSS1LQ765P7 747 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 SLC26A9Q7LBE3 791 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 TAC4Q86UU9 113 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 CELF5Q8N6W0 485 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 DQX1Q8TE96 717 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 RNF139Q8WU17 664 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 GOLGA1Q92805 767 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ELSPBP1Q96BH3 223 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 SLC2A13Q96QE2 648 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 TRIM7Q9C029 511 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 RAB6CQ9H0N0 254 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 LINC00597Q9H2U6 94 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 NHEJ1Q9H9Q4 299 aaPredicted RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 TRPV4Q9HBA0 871 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 POPDC2Q9HBU9 364 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ZNHIT6Q9NWK9 470 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 COX16Q9P0S2 106 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 CALCOCO1Q9P1Z2 691 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 MYO1AQ9UBC5 1043 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 NENFQ9UMX5 172 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 BZW2Q9Y6E2 419 aaKnown RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 WNT6Q9Y6F9 365 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 ZFP37Q9Y6Q3 630 aaPredicted RBP8.66□□□□□ -1.02
SF1-218ENST00000489544 DENND4CQ5VZ89 1909 aa8.66□□□□□ -1.02
SF1-218ENST00000489544 TCRBV5S1A1TA0A578 114 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 SOWAHDA6NJG2 315 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ZNF263O14978 683 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 SART1O43290 800 aaKnown RBP8.65□□□□□ -1.02
SF1-218ENST00000489544 AKR1B10O60218 316 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 GREM1O60565 184 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 HSF2BPO75031 334 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 RTN2O75298 545 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 DAB1O75553 588 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 STC2O76061 302 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 KLKB1P03952 638 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 CALB1P05937 261 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 GZMAP12544 262 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ARSAP15289 507 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 PSMC3P17980 439 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 WEE1P30291 646 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 RPL7AP62424 266 aaKnown RBP8.65□□□□□ -1.02
SF1-218ENST00000489544 USP4Q13107 963 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 TDGQ13569 410 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ZNF268Q14587 947 aaPredicted RBP8.65□□□□□ -1.02
SF1-218ENST00000489544 GSE1Q14687 1217 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 SLC18A3Q16572 532 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 EFHC1Q5JVL4 640 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 MSANTD2Q6P1R3 559 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 DNAJC24Q6P3W2 148 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 KLHDC10Q6PID8 442 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.02
SF1-218ENST00000489544 MFSD6LQ8IWD5 586 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 BBS7Q8IWZ6 715 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 PIP4P2Q8N4L2 257 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 MSANTD4Q8NCY6 345 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 BPIFB1Q8TDL5 484 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ZNF653Q96CK0 615 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ARHGEF26Q96DR7 871 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 CFAP57Q96MR6 1250 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 TRMT61BQ9BVS5 477 aaKnown RBP8.65□□□□□ -1.02
SF1-218ENST00000489544 THAP2Q9H0W7 228 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 ISCUQ9H1K1 167 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 DEF6Q9H4E7 631 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 IGSF9Q9P2J2 1179 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 CNOT8Q9UFF9 292 aaKnown RBP8.65□□□□□ -1.02
SF1-218ENST00000489544 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
SF1-218ENST00000489544 MYO10Q9HD67 2058 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms