RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ANAPC1Q9H1A4 1944 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 ZNF638Q14966 1978 aaKnown RBP18.17■□□□□ 0.5
MDC1-206ENST00000489540 PIK3R2O00459 728 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 GREM1O60565 184 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 CYP11B1P15538 503 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 TCF15Q12870 199 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 TMEM196Q5HYL7 178 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 RHBDF2Q6PJF5 856 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 MAMSTRQ6ZN01 415 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 C1orf210Q8IVY1 113 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 BBS7Q8IWZ6 715 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 P2RY13Q9BPV8 354 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 PDCL3Q9H2J4 239 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 CBX8Q9HC52 389 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 CYTH4Q9UIA0 394 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 ZNF318Q5VUA4 2279 aa18.16■□□□□ 0.5
MDC1-206ENST00000489540 SCAMP3O14828 347 aaKnown RBP18.15■□□□□ 0.5
MDC1-206ENST00000489540 STC2O76061 302 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 LTFP02788 710 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 CYP17A1P05093 508 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 DRD1P21728 446 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 GALK1P51570 392 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 PDCLQ13371 301 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 BEND5Q7L4P6 421 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 WDTC1Q8N5D0 677 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 EDEM1Q92611 657 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 CD101Q93033 1021 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 WBP2Q969T9 261 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 CHFRQ96EP1 664 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 SPAG5Q96R06 1193 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 TRIM62Q9BVG3 475 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 CHRDQ9H2X0 955 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
MDC1-206ENST00000489540 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
MDC1-206ENST00000489540 SLC12A8A0AV02 714 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 SOX5P35711 763 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 STAT1P42224 750 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 GAD2Q05329 585 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 CCINQ13939 588 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 ANGPT1Q15389 498 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 PASD1Q8IV76 773 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 CLEC4CQ8WTT0 213 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 PPP1R13BQ96KQ4 1090 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 NLRC4Q9NPP4 1024 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 SPHK2Q9NRA0 654 aa18.15■□□□□ 0.5
MDC1-206ENST00000489540 HBS1LQ9Y450 684 aaKnown RBP18.15■□□□□ 0.5
MDC1-206ENST00000489540 MYH10P35580 1976 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 PATJQ8NI35 1801 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 E5RJQ4 531 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 EPHB6O15197 1021 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 LAMTOR5O43504 91 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 ADH5P11766 374 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 JAM2P57087 298 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 FBXO43Q4G163 708 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 LY6G5CQ5SRR4 150 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 MSANTD2Q6P1R3 559 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 Q6ZNB5 142 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 ZNF677Q86XU0 584 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 FMNL3Q8IVF7 1028 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 TMEM35BQ8NCS4 154 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 PLD4Q96BZ4 506 aa18.14■□□□□ 0.49
MDC1-206ENST00000489540 H0Y858 1186 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 GOLGA6L19H0YKK7 550 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 HOXC11O43248 304 aaPredicted RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 PAPSS1O43252 624 aaPredicted RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 GFPT2O94808 682 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 LSM8O95777 96 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 SERPINC1P01008 464 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 HMBSP08397 361 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 NCAM1P13591 858 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 CORO1AP31146 461 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 CDH5P33151 784 aaPredicted RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 CHKAP35790 457 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 EIF2DP41214 584 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 HARS2P49590 506 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 MTAPQ13126 283 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 TRIP4Q15650 581 aaPredicted RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 FSTL4Q6MZW2 842 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 LUZP1Q86V48 1076 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 C1orf131Q8NDD1 294 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 CCDC26Q8TAB7 109 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 DDX1Q92499 740 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 FAM149B1Q96BN6 582 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 CPXM1Q96SM3 734 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 FBRSL1Q9HCM7 1045 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 RBM12Q9NTZ6 932 aaKnown RBP18.13■□□□□ 0.49
MDC1-206ENST00000489540 WDR35Q9P2L0 1181 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 SFMBT1Q9UHJ3 866 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 COL4A2P08572 1712 aa18.13■□□□□ 0.49
MDC1-206ENST00000489540 COL4A3Q01955 1670 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 A0A1B0GTH6 734 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.12■□□□□ 0.49
MDC1-206ENST00000489540 CAPN9O14815 690 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 TEX33O43247 280 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 KLKB1P03952 638 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 GLI1P08151 1106 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 OPRD1P41143 372 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 YWHAZP63104 245 aaKnown RBP18.12■□□□□ 0.49
MDC1-206ENST00000489540 GAB4Q2WGN9 574 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms