RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PLD1Q13393 1074 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 BEND5Q7L4P6 421 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 STRADAQ7RTN6 431 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 MON1AQ86VX9 555 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 FAM131BQ86XD5 332 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 SLC22A17Q8WUG5 538 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 RAPGEF5Q92565 580 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 CASP10Q92851 521 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 PSMG2Q969U7 264 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 TIFAQ96CG3 184 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 MYRFLQ96LU7 910 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 CARD9Q9H257 536 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 GPATCH2LQ9NWQ4 482 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 COX16Q9P0S2 106 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 MAFFQ9ULX9 164 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 DENND4CQ5VZ89 1909 aa15.17■□□□□ 0.02
LRIF1-202ENST00000485275 C3orf70A6NLC5 250 aaPredicted RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 PI4K2BG5E9Z4 385 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 MDM4O15151 490 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 MSI1O43347 362 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RFPL2O75678 378 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RNF8O76064 485 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 TBX18O95935 607 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 CD48P09326 243 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RARAP10276 462 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 NME3Q13232 169 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 CA9Q16790 459 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 LRRC38Q5VT99 294 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 POLNQ7Z5Q5 900 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 DNAJB7Q7Z6W7 309 aaPredicted RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RBM23Q86U06 439 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 KATNAL2Q8IYT4 538 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RASGEF1CQ8N431 466 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 UBL4BQ8N7F7 174 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 LRRC3Q9BY71 257 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 SMOC2Q9H3U7 446 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 CCSER2Q9H7U1 834 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 IL21Q9HBE4 155 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 MAN1C1Q9NR34 630 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 ABCC13Q9NSE7 274 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 SFMBT1Q9UHJ3 866 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 STAP1Q9ULZ2 295 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 CSH1P0DML2 217 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 CSH2P0DML3 217 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 RWDD2BP57060 319 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 ZC3H12AQ5D1E8 599 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 BTBD8Q5XKL5 378 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 TMC8Q8IU68 726 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 ZDHHC14Q8IZN3 488 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 VN1R2Q8NFZ6 395 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 PGAP3Q96FM1 320 aaPredicted RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 TRMT2BQ96GJ1 504 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 SNRNP25Q9BV90 132 aaKnown RBP15.16■□□□□ 0.02
LRIF1-202ENST00000485275 COMMD8Q9NX08 183 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 DDIT4Q9NX09 232 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 HCFC2Q9Y5Z7 792 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 NOTCH4Q99466 2003 aa15.16■□□□□ 0.02
LRIF1-202ENST00000485275 C5orf42Q9H799 3197 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 SPTBN5Q9NRC6 3674 aaKnown RBP15.15■□□□□ 0.02
LRIF1-202ENST00000485275 TCRBV7S2A1N4TA0A589 114 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 CES2O00748 559 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 IRAK2O43187 625 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 CEP104O60308 925 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 KRT1P04264 644 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 ARSEP51690 589 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 ADCY2Q08462 1091 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 MSANTD2Q6P1R3 559 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 SCYL2Q6P3W7 929 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 HS6ST3Q8IZP7 471 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 GOLGA1Q92805 767 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 CARD6Q9BX69 1037 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 FAM204AQ9H8W3 233 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 CLIC5Q9NZA1 410 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
LRIF1-202ENST00000485275 ZNF840PA6NDX5 716 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 CCL16O15467 120 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 RARGP13631 454 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 EPHB3P54753 998 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 DEUP1Q05D60 604 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 MFSD7Q6UXD7 560 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 HSPH1Q92598 858 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 RNF25Q96BH1 459 aaPredicted RBP15.14■□□□□ 0.01
LRIF1-202ENST00000485275 PBKQ96KB5 322 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 SLITRK1Q96PX8 696 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 TLR8Q9NR97 1041 aaKnown RBP15.14■□□□□ 0.01
LRIF1-202ENST00000485275 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.14■□□□□ 0.01
LRIF1-202ENST00000485275 HCFC1R1Q9NWW0 138 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 MYO9BQ13459 2157 aa15.14■□□□□ 0.01
LRIF1-202ENST00000485275 PRPSAP2O60256 369 aa15.13■□□□□ 0.01
LRIF1-202ENST00000485275 TLR5O60602 858 aa15.13■□□□□ 0.01
LRIF1-202ENST00000485275 KCNC3Q14003 757 aa15.13■□□□□ 0.01
LRIF1-202ENST00000485275 VEPH1Q14D04 833 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms