RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 RNF139Q8WU17 664 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 NUCKS1Q9H1E3 243 aaKnown RBP17.03■□□□□ 0.32
COL2A1-206ENST00000483376 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 GTSE1Q9NYZ3 720 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 AIPL1Q9NZN9 384 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 MARCH2Q9P0N8 246 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 SH3BP1Q9Y3L3 701 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 HBS1LQ9Y450 684 aaKnown RBP17.03■□□□□ 0.32
COL2A1-206ENST00000483376 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 ZNF318Q5VUA4 2279 aa17.03■□□□□ 0.32
COL2A1-206ENST00000483376 STC2O76061 302 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 PDGFBP01127 241 aaPredicted RBP17.02■□□□□ 0.32
COL2A1-206ENST00000483376 FYNP06241 537 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 MMEP08473 750 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 CHRNB2P17787 502 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 CTHP32929 405 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 MAGEA9P43362 315 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 KPNA1P52294 538 aaPredicted RBP17.02■□□□□ 0.32
COL2A1-206ENST00000483376 NOMO3P69849 1222 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 FMO1Q01740 532 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 TNK2Q07912 1038 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 TRIP4Q15650 581 aaPredicted RBP17.02■□□□□ 0.32
COL2A1-206ENST00000483376 Q6ZNB5 142 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 RSRC2Q7L4I2 434 aaKnown RBP17.02■□□□□ 0.32
COL2A1-206ENST00000483376 IRF2BP2Q7Z5L9 587 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 MSANTD4Q8NCY6 345 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 PJA1Q8NG27 643 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 CLEC4CQ8WTT0 213 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 NDRG1Q92597 394 aaKnown RBP17.02■□□□□ 0.32
COL2A1-206ENST00000483376 PLD4Q96BZ4 506 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 DCLK3Q9C098 648 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 EBF3Q9H4W6 596 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 POPDC2Q9HBU9 364 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 IFNKQ9P0W0 207 aa17.02■□□□□ 0.32
COL2A1-206ENST00000483376 LSM7Q9UK45 103 aaKnown RBP17.02■□□□□ 0.32
COL2A1-206ENST00000483376 OTOL1A6NHN0 477 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-206ENST00000483376 SPECC1L-ADORA2AF8WAN1 911 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 CBFA2T2O43439 604 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 LATS1O95835 1130 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 ARSAP15289 507 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 PRKCIP41743 596 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 YWHAZP63104 245 aaKnown RBP17.01■□□□□ 0.31
COL2A1-206ENST00000483376 RING1Q06587 406 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 NR1H3Q13133 447 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 EFHC1Q5JVL4 640 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 OLFML1Q6UWY5 402 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 TOGARAM2Q6ZUX3 1019 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 SLC26A9Q7LBE3 791 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 ARCQ7LC44 396 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 SLC20A1Q8WUM9 679 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 SYN2Q92777 582 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-206ENST00000483376 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 SLC2A13Q96QE2 648 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 SYT11Q9BT88 431 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 KCNH6Q9H252 994 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 LTB4R2Q9NPC1 389 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 TMEM51Q9NW97 253 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 RASAL2Q9UJF2 1139 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 NUDT5Q9UKK9 219 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 TICRRQ7Z2Z1 1910 aa17.01■□□□□ 0.31
COL2A1-206ENST00000483376 MDM4O15151 490 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 HSF2BPO75031 334 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 IGLV3-27P01718 113 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 ERBB2P04626 1255 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 UNGP13051 313 aaPredicted RBP17■□□□□ 0.31
COL2A1-206ENST00000483376 AVPR2P30518 371 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 EIF2DP41214 584 aaKnown RBP17■□□□□ 0.31
COL2A1-206ENST00000483376 RPS9P46781 194 aaKnown RBP17■□□□□ 0.31
COL2A1-206ENST00000483376 GSCP56915 257 aaPredicted RBP17■□□□□ 0.31
COL2A1-206ENST00000483376 EFEMP1Q12805 493 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 TAF3Q5VWG9 929 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 SARM1Q6SZW1 724 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 MIB1Q86YT6 1006 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 FAM217AQ8IXS0 508 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 FLCNQ8NFG4 579 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 FAM3CQ92520 227 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 EDEM1Q92611 657 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 CHFRQ96EP1 664 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 IER2Q9BTL4 223 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 XPO4Q9C0E2 1151 aaKnown RBP17■□□□□ 0.31
COL2A1-206ENST00000483376 LINC00597Q9H2U6 94 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 TJP2Q9UDY2 1190 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 STOML2Q9UJZ1 356 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 SIT1Q9Y3P8 196 aa17■□□□□ 0.31
COL2A1-206ENST00000483376 LRRC53A6NM62 1247 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 PIK3R2O00459 728 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 TRDMT1O14717 391 aaKnown RBP16.99■□□□□ 0.31
COL2A1-206ENST00000483376 NCAM2O15394 837 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 HOXC11O43248 304 aaPredicted RBP16.99■□□□□ 0.31
COL2A1-206ENST00000483376 ADH1CP00326 375 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 IGLV3-25P01717 112 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 CYP17A1P05093 508 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 MMP8P22894 467 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 GJA4P35212 333 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms