RNA–Protein interactions for RNA: ENST00000483311.5

ATXN2-210, Transcript of ataxin 2, humanhuman

TSL 1 (best)

Gene ATXN2, Length 4,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-210ENST00000483311 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 PMPCBO75439 489 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 SPAG6O75602 509 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 STBD1O95210 358 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 PAMP19021 973 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 TGM2P21980 687 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 RPL22P35268 128 aaKnown RBP12.18□□□□□ -0.46
ATXN2-210ENST00000483311 PRKCZQ05513 592 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 ITGA7Q13683 1181 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 NFE2Q16621 373 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-210ENST00000483311 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 RIBC1Q8N443 379 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-210ENST00000483311 SH3TC2Q8TF17 1288 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 RNF157Q96PX1 679 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 CATSPERBQ9H7T0 1116 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 ACTR5Q9H9F9 607 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-210ENST00000483311 CDHR5Q9HBB8 845 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 POPDC2Q9HBU9 364 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-210ENST00000483311 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 ARHGAP42A6NI28 874 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 ALDH2P05091 517 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 SNRPAP09012 282 aaKnown RBP12.18□□□□□ -0.46
ATXN2-210ENST00000483311 SLC39A12Q504Y0 691 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 LVRNQ6Q4G3 990 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 TRPC7Q9HCX4 862 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 UBP1Q9NZI7 540 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 CTNNAL1Q9UBT7 734 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 ANKRD31Q8N7Z5 1873 aa12.18□□□□□ -0.46
ATXN2-210ENST00000483311 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PRRG1O14668 218 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 NOS2P35228 1153 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 C4orf22Q6V702 233 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 DDX1Q92499 740 aaKnown RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 EXT2Q93063 718 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 ART4Q93070 314 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 WNT8BQ93098 351 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 GCNAQ96QF7 691 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PAFAH2Q99487 392 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 FRMD8Q9BZ67 464 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PPARGC1AQ9UBK2 798 aaKnown RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 CACNG4Q9UBN1 327 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 SIX4Q9UIU6 781 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 IGF2BP3O00425 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PFDN6O15212 129 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 CA12O43570 354 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 IRF1P10914 325 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 ETFBP38117 255 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 DNAJC3Q13217 504 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 DPYSL3Q14195 570 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 ANKRD20A8PQ5CZ79 823 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 ZCCHC9Q8N567 271 aaKnown RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 ALLCQ8N6M5 410 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 COLGALT1Q8NBJ5 622 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 DRG1Q9Y295 367 aaKnown RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 ADAMTSL1Q8N6G6 1762 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 SMCHD1A6NHR9 2005 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PIAS1O75925 651 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 LMO2P25791 158 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 FDFT1P37268 417 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PRAMEP78395 509 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 TADA2BQ86TJ2 420 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 SLC25A41Q8N5S1 370 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 RPRD1AQ96P16 312 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 RAB3IPQ96QF0 476 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PPCSQ9HAB8 311 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
ATXN2-210ENST00000483311 PRRC2BQ5JSZ5 2229 aaKnown RBP12.17□□□□□ -0.46
ATXN2-210ENST00000483311 MEFVO15553 781 aaPredicted RBP12.16□□□□□ -0.46
ATXN2-210ENST00000483311 SEPT4O43236 478 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 MTSS1O43312 755 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 BANF1O75531 89 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 HSPA4LO95757 839 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 PCK1P35558 622 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 LILRA4P59901 499 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 ZNF280DQ6N043 979 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 ZNF572Q7Z3I7 529 aaPredicted RBP12.16□□□□□ -0.46
ATXN2-210ENST00000483311 UNC45BQ8IWX7 931 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 CABYRO75952 493 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 POLBP06746 335 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 CD48P09326 243 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 ASPHQ12797 758 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 FAM187BQ17R55 369 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
ATXN2-210ENST00000483311 TMEM169Q96HH4 297 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 GIT1Q9Y2X7 761 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 F2P00734 622 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 TCF4P15884 667 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 RNF135Q8IUD6 432 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 HTR3CQ8WXA8 447 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 ALKBH8Q96BT7 664 aaKnown RBP12.16□□□□□ -0.46
ATXN2-210ENST00000483311 C20orf96Q9NUD7 363 aaPredicted RBP12.16□□□□□ -0.46
ATXN2-210ENST00000483311 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
ATXN2-210ENST00000483311 SRLQ86TD4 932 aa12.15□□□□□ -0.46
ATXN2-210ENST00000483311 FAM35AQ86V20 835 aa12.15□□□□□ -0.46
ATXN2-210ENST00000483311 TOP6BLQ8N6T0 577 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms