RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GALNT15Q8N3T1 639 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 LTV1Q96GA3 475 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-210ENST00000482158 PRR11Q96HE9 360 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-210ENST00000482158 RTKNQ9BST9 563 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 DDX23Q9BUQ8 820 aaKnown RBP6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FSD1LQ9BXM9 530 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-210ENST00000482158 ITM2CQ9NQX7 267 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 GXYLT2A0PJZ3 443 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 CCDC151A5D8V7 595 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 CTIFO43310 598 aaKnown RBP6.6□□□□□ -1.35
SF3B1-210ENST00000482158 FZD7O75084 574 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 CER1O95813 267 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 CREB1P16220 341 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 ACVRL1P37023 503 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 RARRES1P49788 294 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 PRKG1Q13976 671 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 ST3GAL2Q16842 350 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 TIGD6Q17RP2 521 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 ANKRD16Q6P6B7 361 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 PCSK4Q6UW60 755 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 PTCHD4Q6ZW05 846 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 NRSN1Q8IZ57 195 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 SIRT6Q8N6T7 355 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 AMER2Q8N7J2 671 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.6□□□□□ -1.35
SF3B1-210ENST00000482158 PRRX2Q99811 253 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 PAGR1Q9BTK6 254 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
SF3B1-210ENST00000482158 KAT6AQ92794 2004 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 TMEM191CA6NGB0 347 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 CES2O00748 559 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 ZNF213O14771 459 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 CA12O43570 354 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 RPP40O75818 363 aaKnown RBP6.59□□□□□ -1.35
SF3B1-210ENST00000482158 FAM155BO75949 473 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 TTLL1O95922 423 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 FGAP02671 866 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 DLDP09622 509 aaKnown RBP6.59□□□□□ -1.35
SF3B1-210ENST00000482158 EBLN1P0CF75 366 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 DRD1P21728 446 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 FPR3P25089 353 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 DIO1P49895 249 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 POLE2P56282 527 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
SF3B1-210ENST00000482158 AP2B1P63010 937 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 TAF5Q15542 800 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 BTBD16Q32M84 506 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 RNASE12Q5GAN4 147 aaKnown RBP6.59□□□□□ -1.35
SF3B1-210ENST00000482158 KLHL17Q6TDP4 642 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 SLC9A6Q92581 669 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 SCLT1Q96NL6 688 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 PAAF1Q9BRP4 392 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 TTPALQ9BTX7 342 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 SAP30LQ9HAJ7 183 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 RXFP3Q9NSD7 469 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 CCNL1Q9UK58 526 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-210ENST00000482158 PACSIN3Q9UKS6 424 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 AMFRQ9UKV5 643 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 DAPP1Q9UN19 280 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 ADAMTS5Q9UNA0 930 aa6.59□□□□□ -1.35
SF3B1-210ENST00000482158 PDE8BO95263 885 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 MBPP02686 304 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-210ENST00000482158 GCP02774 474 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 FAM163BP0C2L3 166 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 NDUFB7P17568 137 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 DRD4P21917 467 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 ADRA1DP25100 572 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 CST5P28325 142 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-210ENST00000482158 AKT1P31749 480 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 CCT8P50990 548 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 EEFSECP57772 596 aaKnown RBP6.58□□□□□ -1.36
SF3B1-210ENST00000482158 DNASE1L3Q13609 305 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 L1TD1Q5T7N2 865 aaKnown RBP6.58□□□□□ -1.36
SF3B1-210ENST00000482158 CCDC144NLQ6NUI1 221 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 CPXCR1Q8N123 301 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 ABHD11Q8NFV4 315 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 MACROD1Q9BQ69 325 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 VPS16Q9H269 839 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 SAGE1Q9NXZ1 904 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 MGAT4CQ9UBM8 478 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 CNTN6Q9UQ52 1028 aa6.58□□□□□ -1.36
SF3B1-210ENST00000482158 LOC105369274A0A096LPK9 316 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 LOC102723532A0A0G2JNH3 316 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 B9A039 149 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 MYCLP12524 364 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-210ENST00000482158 PRKAA2P54646 552 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 ARL4CP56559 192 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 ZXDAP98168 799 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 LMAN2Q12907 356 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 KLF10Q13118 480 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 PPFIA1Q13136 1202 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 CSHL1Q14406 222 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 TBC1D25Q3MII6 688 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 AARS2Q5JTZ9 985 aaKnown RBP6.57□□□□□ -1.36
SF3B1-210ENST00000482158 MTHFD1LQ6UB35 978 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 TRABD2AQ86V40 505 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 MOGAT3Q86VF5 341 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 OR4N4Q8N0Y3 316 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms