RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 EIF3EP60228 445 aaKnown RBP15.03■□□□□ -0
CHD3-211ENST00000481999 KRT81Q14533 505 aa15.03■□□□□ -0
CHD3-211ENST00000481999 STAT4Q14765 748 aa15.03■□□□□ -0
CHD3-211ENST00000481999 DCAF6Q58WW2 860 aa15.03■□□□□ -0
CHD3-211ENST00000481999 HIBCHQ6NVY1 386 aaPredicted RBP15.03■□□□□ -0
CHD3-211ENST00000481999 DEFB106AQ8N104 65 aa15.03■□□□□ -0
CHD3-211ENST00000481999 PQLC3Q8N755 202 aa15.03■□□□□ -0
CHD3-211ENST00000481999 ZMIZ2Q8NF64 920 aa15.03■□□□□ -0
CHD3-211ENST00000481999 PCDH19Q8TAB3 1148 aa15.03■□□□□ -0
CHD3-211ENST00000481999 RTP3Q9BQQ7 232 aa15.03■□□□□ -0
CHD3-211ENST00000481999 CFHR5Q9BXR6 569 aa15.03■□□□□ -0
CHD3-211ENST00000481999 MRPL42Q9Y6G3 142 aaKnown RBP15.03■□□□□ -0
CHD3-211ENST00000481999 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.03■□□□□ -0
CHD3-211ENST00000481999 A0A0U1RQF3 1178 aa15.03■□□□□ -0
CHD3-211ENST00000481999 CHUKO15111 745 aa15.03■□□□□ -0
CHD3-211ENST00000481999 CKBP12277 381 aa15.03■□□□□ -0
CHD3-211ENST00000481999 CREB1P16220 341 aa15.03■□□□□ -0
CHD3-211ENST00000481999 NPR3P17342 541 aa15.03■□□□□ -0
CHD3-211ENST00000481999 OTUD1Q5VV17 481 aaPredicted RBP15.03■□□□□ -0
CHD3-211ENST00000481999 CD300LGQ6UXG3 332 aa15.03■□□□□ -0
CHD3-211ENST00000481999 TRPM8Q7Z2W7 1104 aa15.03■□□□□ -0
CHD3-211ENST00000481999 RNF180Q86T96 592 aa15.03■□□□□ -0
CHD3-211ENST00000481999 ZNF280BQ86YH2 543 aa15.03■□□□□ -0
CHD3-211ENST00000481999 PLD5Q8N7P1 536 aa15.03■□□□□ -0
CHD3-211ENST00000481999 MGARPQ8TDB4 240 aa15.03■□□□□ -0
CHD3-211ENST00000481999 SH3TC2Q8TF17 1288 aa15.03■□□□□ -0
CHD3-211ENST00000481999 NKD2Q969F2 451 aaPredicted RBP15.03■□□□□ -0
CHD3-211ENST00000481999 RBM15Q96T37 977 aaKnown RBP eCLIP15.03■□□□□ -0
CHD3-211ENST00000481999 SYT15Q9BQS2 421 aa15.03■□□□□ -0
CHD3-211ENST00000481999 DUSP16Q9BY84 665 aa15.03■□□□□ -0
CHD3-211ENST00000481999 DHX35Q9H5Z1 703 aaKnown RBP15.03■□□□□ -0
CHD3-211ENST00000481999 PCDH18Q9HCL0 1135 aa15.03■□□□□ -0
CHD3-211ENST00000481999 KCNK9Q9NPC2 374 aa15.03■□□□□ -0
CHD3-211ENST00000481999 TMLHEQ9NVH6 421 aa15.03■□□□□ -0
CHD3-211ENST00000481999 SLC12A4Q9UP95 1085 aa15.03■□□□□ -0
CHD3-211ENST00000481999 TDRD15B5MCY1 1934 aaKnown RBP15.03■□□□□ -0
CHD3-211ENST00000481999 BRAFP15056 766 aa15.02■□□□□ -0
CHD3-211ENST00000481999 LRRC14Q15048 493 aa15.02■□□□□ -0
CHD3-211ENST00000481999 LHX8Q68G74 356 aa15.02■□□□□ -0
CHD3-211ENST00000481999 SLC26A9Q7LBE3 791 aa15.02■□□□□ -0
CHD3-211ENST00000481999 PARP9Q8IXQ6 854 aa15.02■□□□□ -0
CHD3-211ENST00000481999 ZCCHC9Q8N567 271 aaKnown RBP15.02■□□□□ -0
CHD3-211ENST00000481999 HNRNPABQ99729 332 aaKnown RBP15.02■□□□□ -0
CHD3-211ENST00000481999 SMOQ99835 787 aa15.02■□□□□ -0
CHD3-211ENST00000481999 ETNK2Q9NVF9 386 aa15.02■□□□□ -0
CHD3-211ENST00000481999 HCSTQ9UBK5 93 aa15.02■□□□□ -0
CHD3-211ENST00000481999 TBK1Q9UHD2 729 aa15.02■□□□□ -0
CHD3-211ENST00000481999 NAALADL1Q9UQQ1 740 aa15.02■□□□□ -0
CHD3-211ENST00000481999 ACTL7BQ9Y614 415 aa15.02■□□□□ -0
CHD3-211ENST00000481999 TCP11X1B4DZS4 312 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 F5H423 210 aaPredicted RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 DNALI1O14645 258 aaPredicted RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 ENDOD1O94919 500 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 ITGAVP06756 1048 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 ABHD2P08910 425 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 HSPA1AP0DMV8 641 aaKnown RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 HSPA1BP0DMV9 641 aaKnown RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 RPL22P35268 128 aaKnown RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 TKTL1P51854 596 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 BCAR1P56945 870 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 NKX3-2P78367 333 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 NME3Q13232 169 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 DSC3Q14574 896 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 FAXCQ5TGI0 409 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 DRICH1Q6PGQ1 229 aaPredicted RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 PCSK9Q8NBP7 692 aaKnown RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 CKAP2Q8WWK9 683 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 LINC01599Q8WXQ3 324 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 MRRFQ96E11 262 aaKnown RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 RNF157Q96PX1 679 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 C11orf84Q9BUA3 381 aaPredicted RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 CHST12Q9NRB3 414 aa15.02□□□□□ -0.01
CHD3-211ENST00000481999 USP15Q9Y4E8 981 aaPredicted RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 MYO18AQ92614 2054 aaKnown RBP15.02□□□□□ -0.01
CHD3-211ENST00000481999 YJEFN3A6XGL0 299 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 E7ENQ6 273 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 APOC4-APOC2K7ER74 178 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 AP1G2O75843 785 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 OAS1P00973 400 aaKnown RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 APOC2P02655 101 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 OR4Q2P0C623 313 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 SETSIPP0DME0 302 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 CST5P28325 142 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 CTCFP49711 727 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 GBE1Q04446 702 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 IFRD2Q12894 506 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 SNCBQ16143 134 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 MSS51Q4VC12 460 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 TRAF7Q6Q0C0 670 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 LRRTM3Q86VH5 581 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 ANKMY2Q8IV38 441 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 OR10T2Q8NGX3 314 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 GLT1D1Q96MS3 346 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 MAK16Q9BXY0 300 aaKnown RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 FAM124BQ9H5Z6 455 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 SAYSD1Q9NPB0 183 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 SLC38A7Q9NVC3 462 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 GIT1Q9Y2X7 761 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms