RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PRPSAP2O60256 369 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 ZMYND10O75800 440 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 KRT7P08729 469 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 RARGP13631 454 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 IL1R2P27930 398 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 ATXN1P54253 815 aaKnown RBP18.33■□□□□ 0.52
UPF3A-206ENST00000480362 NME3Q13232 169 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 TUBB2AQ13885 445 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 DCAF12L1Q5VU92 463 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 TXNRD3NBQ6F5E7 133 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 RTL10Q7L3V2 364 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 RSRC2Q7L4I2 434 aaKnown RBP18.33■□□□□ 0.52
UPF3A-206ENST00000480362 ADAM32Q8TC27 787 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 DQX1Q8TE96 717 aaKnown RBP18.33■□□□□ 0.52
UPF3A-206ENST00000480362 HDAC7Q8WUI4 952 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 PEBP4Q96S96 227 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 TUBB2BQ9BVA1 445 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 FAM204AQ9H8W3 233 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
UPF3A-206ENST00000480362 COX16Q9P0S2 106 aa18.33■□□□□ 0.52
UPF3A-206ENST00000480362 COL4A4P53420 1690 aaPredicted RBP18.33■□□□□ 0.52
UPF3A-206ENST00000480362 MTCL1Q9Y4B5 1905 aaKnown RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 GBP1P32455 592 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 RDXP35241 583 aaKnown RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 ZNF211Q13398 564 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 DUSP6Q16828 381 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 ZFYVE27Q5T4F4 411 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 POLNQ7Z5Q5 900 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 TAC4Q86UU9 113 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 KATNAL2Q8IYT4 538 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 ELMOD1Q8N336 334 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 CASP10Q92851 521 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 PGAP3Q96FM1 320 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 ZNF576Q9H609 170 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 ZNF334Q9HCZ1 680 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 DDIT4Q9NX09 232 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 DDX56Q9NY93 547 aaKnown RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 TRPM5Q9NZQ8 1165 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 UXTQ9UBK9 157 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-206ENST00000480362 SFMBT1Q9UHJ3 866 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 HCFC2Q9Y5Z7 792 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 MRFAP1Q9Y605 127 aa18.32■□□□□ 0.52
UPF3A-206ENST00000480362 ZNF840PA6NDX5 716 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 CES2O00748 559 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 CCL16O15467 120 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 CEP104O60308 925 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 F9P00740 461 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 RARAP10276 462 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 PYGMP11217 842 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 PPP3CCP48454 512 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 NRIP1P48552 1158 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 SMTNL2Q2TAL5 461 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 LRIT3Q3SXY7 679 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 BOLA3Q53S33 107 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 KCNT1Q5JUK3 1230 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 SNX30Q5VWJ9 437 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 MSANTD2Q6P1R3 559 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 CYP4V2Q6ZWL3 525 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-206ENST00000480362 FAM131BQ86XD5 332 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 CREG2Q8IUH2 290 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 HS6ST3Q8IZP7 471 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 CARD9Q9H257 536 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 SMOC2Q9H3U7 446 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 OLA1Q9NTK5 396 aaKnown RBP18.31■□□□□ 0.52
UPF3A-206ENST00000480362 PIGVQ9NUD9 493 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.31■□□□□ 0.52
UPF3A-206ENST00000480362 DPP7Q9UHL4 492 aa18.31■□□□□ 0.52
UPF3A-206ENST00000480362 COLQQ9Y215 455 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-206ENST00000480362 ATG2AQ2TAZ0 1938 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 A0A1W2PPC1 479 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 RFPL2O75678 378 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 ZRANB2O95218 330 aaKnown RBP eCLIP18.3■□□□□ 0.52
UPF3A-206ENST00000480362 TBX18O95935 607 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 IGLV3-25P01717 112 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 F11P03951 625 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 KRT1P04264 644 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 EFEMP1Q12805 493 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 C10orf120Q5SQS8 335 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 AADACL2Q6P093 401 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 SND1Q7KZF4 910 aaKnown RBP eCLIP18.3■□□□□ 0.52
UPF3A-206ENST00000480362 RCOR2Q8IZ40 523 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 ZNF276Q8N554 614 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 EXD1Q8NHP7 514 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 HSPH1Q92598 858 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 RNF25Q96BH1 459 aaPredicted RBP18.3■□□□□ 0.52
UPF3A-206ENST00000480362 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
UPF3A-206ENST00000480362 LRRC3Q9BY71 257 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 CCSER2Q9H7U1 834 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 L2HGDHQ9H9P8 463 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 IL21Q9HBE4 155 aa18.3■□□□□ 0.52
UPF3A-206ENST00000480362 WDR6Q9NNW5 1121 aaKnown RBP18.3■□□□□ 0.52
UPF3A-206ENST00000480362 PI4K2BG5E9Z4 385 aa18.29■□□□□ 0.52
UPF3A-206ENST00000480362 MDM4O15151 490 aa18.29■□□□□ 0.52
UPF3A-206ENST00000480362 IRAK2O43187 625 aa18.29■□□□□ 0.52
UPF3A-206ENST00000480362 TLR5O60602 858 aa18.29■□□□□ 0.52
UPF3A-206ENST00000480362 TADA3O75528 432 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms