RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TRMT11Q7Z4G4 463 aaKnown RBP15.08■□□□□ 0
ATG4B-218ENST00000479554 TERB1Q8NA31 727 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 SPATA20Q8TB22 786 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 TATDN2Q93075 761 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 TIGD1Q96MW7 591 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 FAM124BQ9H5Z6 455 aaPredicted RBP15.08■□□□□ 0
ATG4B-218ENST00000479554 POLMQ9NP87 494 aaPredicted RBP15.08■□□□□ 0
ATG4B-218ENST00000479554 ZDHHC4Q9NPG8 344 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 ARMCX3Q9UH62 379 aaPredicted RBP15.08■□□□□ 0
ATG4B-218ENST00000479554 DNMT3LQ9UJW3 386 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 NUDT5Q9UKK9 219 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 INVSQ9Y283 1065 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 NCOR2Q9Y618 2525 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 MYOFQ9NZM1 2061 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 SYCE3A1L190 88 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 NEDD8-MDP1E9PL57 170 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 PSMA7O14818 248 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 CHRM1P11229 460 aaPredicted RBP15.07■□□□□ 0
ATG4B-218ENST00000479554 HNRNPLP14866 589 aaKnown RBP eCLIP15.07■□□□□ 0
ATG4B-218ENST00000479554 PLA2G4AP47712 749 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 CREB5Q02930 508 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 C10orf76Q5T2E6 689 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 EMC10Q5UCC4 262 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 PMS2CLQ68D20 193 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 ARHGAP17Q68EM7 881 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 IL31Q6EBC2 164 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 GRAMD4Q6IC98 578 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 LRSAM1Q6UWE0 723 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 SCD5Q86SK9 330 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 MIB1Q86YT6 1006 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 ZNF513Q8N8E2 541 aaPredicted RBP15.07■□□□□ 0
ATG4B-218ENST00000479554 XPO6Q96QU8 1125 aaKnown RBP15.07■□□□□ 0
ATG4B-218ENST00000479554 CDK5RAP1Q96SZ6 601 aaKnown RBP15.07■□□□□ 0
ATG4B-218ENST00000479554 BBS2Q9BXC9 721 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 SMOC1Q9H4F8 434 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 VPS45Q9NRW7 570 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 DNAJC17Q9NVM6 304 aaKnown RBP15.07■□□□□ 0
ATG4B-218ENST00000479554 CLIC5Q9NZA1 410 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 BCCIPQ9P287 314 aaKnown RBP eCLIP15.07■□□□□ 0
ATG4B-218ENST00000479554 COQ4Q9Y3A0 265 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 USP3Q9Y6I4 520 aa15.07■□□□□ 0
ATG4B-218ENST00000479554 CACNG3O60359 315 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 TYRP14679 529 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 LIMK1P53667 647 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 YWHAEP62258 255 aaKnown RBP15.06■□□□□ 0
ATG4B-218ENST00000479554 CUL2Q13617 745 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 TPGS1Q6ZTW0 290 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 PIGZQ86VD9 579 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 ARHGAP18Q8N392 663 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 ZNF276Q8N554 614 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 KCNV2Q8TDN2 545 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 SLC35C1Q96A29 364 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 SPACA7Q96KW9 195 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 NUP62CLQ9H1M0 184 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 MARK1Q9P0L2 795 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 WDR35Q9P2L0 1181 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 RASAL2Q9UJF2 1139 aa15.06■□□□□ 0
ATG4B-218ENST00000479554 TCRBV21S2A2A0A5A6 115 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 BCLAF3A2AJT9 711 aaKnown RBP15.05■□□□□ -0
ATG4B-218ENST00000479554 TRIM24O15164 1050 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 ADAM23O75077 832 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 STC2O76061 302 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 BCKDHBP21953 392 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 PPP1R2P41236 205 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 BCAT1P54687 386 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 EFEMP1Q12805 493 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 GOLGA7BQ2TAP0 167 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 PPM1JQ5JR12 505 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 Q6ZNB5 142 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 ANKRD52Q8NB46 1076 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 HMGB4Q8WW32 186 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 CEP63Q96MT8 703 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 UBXN6Q9BZV1 441 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 CLSTN2Q9H4D0 955 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 METTL14Q9HCE5 456 aaKnown RBP15.05■□□□□ -0
ATG4B-218ENST00000479554 RXFP3Q9NSD7 469 aa15.05■□□□□ -0
ATG4B-218ENST00000479554 SDK1Q7Z5N4 2213 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 CAVIN2O95810 425 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 HMBSP08397 361 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 HOXB2P14652 356 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 CD19P15391 556 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 KCNA4P22459 653 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 TBXAS1P24557 533 aaPredicted RBP15.04■□□□□ -0
ATG4B-218ENST00000479554 P2RY2P41231 377 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 COG7P83436 770 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 CCDC40Q4G0X9 1142 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 SGO2Q562F6 1265 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 RAB41Q5JT25 222 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 ISM2Q6H9L7 571 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 TCEAL6Q6IPX3 200 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 RSRC2Q7L4I2 434 aaKnown RBP15.04■□□□□ -0
ATG4B-218ENST00000479554 CYP2U1Q7Z449 544 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 ELOA2Q8IYF1 753 aaPredicted RBP15.04■□□□□ -0
ATG4B-218ENST00000479554 PGBD3Q8N328 593 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 OLIG1Q8TAK6 271 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 RLN3Q8WXF3 142 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 DDX1Q92499 740 aaKnown RBP15.04■□□□□ -0
ATG4B-218ENST00000479554 BHMTQ93088 406 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 TCEAL3Q969E4 200 aa15.04■□□□□ -0
ATG4B-218ENST00000479554 DHTKD1Q96HY7 919 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms