RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-209ENST00000477692 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
EXOSC1-209ENST00000477692 TAS2R14Q9NYV8 317 aa13.81□□□□□ -0.2
EXOSC1-209ENST00000477692 ADAM22Q9P0K1 906 aa13.81□□□□□ -0.2
EXOSC1-209ENST00000477692 SORCS3Q9UPU3 1222 aa13.81□□□□□ -0.2
EXOSC1-209ENST00000477692 NAALADL1Q9UQQ1 740 aa13.81□□□□□ -0.2
EXOSC1-209ENST00000477692 TMCO5BA8MYB1 307 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 CALB1P05937 261 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 NCAM1P13591 858 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 GSCP56915 257 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 CDK17Q00537 523 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 GRM2Q14416 872 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 MTF1Q14872 753 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 FAM102AQ5T9C2 384 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 MCOLN2Q8IZK6 566 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 DEFB106AQ8N104 65 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 GKN1Q9NS71 199 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 ADAMTS1Q9UHI8 967 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 RASAL2Q9UJF2 1139 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 STRIP2Q9ULQ0 834 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 DUSP12Q9UNI6 340 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 COL4A2P08572 1712 aa13.8□□□□□ -0.2
EXOSC1-209ENST00000477692 A0A087X0T9 212 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 SSU72P8A0A1W2PR75 194 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 CAPN9O14815 690 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 NARSO43776 548 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 RTN2O75298 545 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 DAB1O75553 588 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 GRAP2O75791 330 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 FAM228BP0C875 321 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 SRFP11831 508 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 ASTE1Q2TB18 679 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 SYPL2Q5VXT5 272 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 KIAA1958Q8N8K9 716 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 DQX1Q8TE96 717 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 WBP2Q969T9 261 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 VCPIP1Q96JH7 1222 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 CHP1Q99653 195 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 ISCUQ9H1K1 167 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 SMOC2Q9H3U7 446 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 THG1LQ9NWX6 298 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 CFAP97Q9P2B7 532 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 IMPACTQ9P2X3 320 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 SFMBT1Q9UHJ3 866 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 TMEM59LQ9UK28 342 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 NENFQ9UMX5 172 aa13.79□□□□□ -0.2
EXOSC1-209ENST00000477692 TICRRQ7Z2Z1 1910 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 SLC12A8A0AV02 714 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 CHADO15335 359 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 GREM1O60565 184 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 IGLV3-25P01717 112 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 FTLP02792 175 aaPredicted RBP13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 GDI1P31150 447 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 NOS2P35228 1153 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 GPC5P78333 572 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 COG7P83436 770 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 ARCQ7LC44 396 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 DNAAF5Q86Y56 855 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 UBALD2Q8IYN6 164 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 SPC24Q8NBT2 197 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 C3orf20Q8ND61 904 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 FAM83CQ9BQN1 747 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 SLC2A4RGQ9NR83 387 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 SH3BP1Q9Y3L3 701 aa13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-209ENST00000477692 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 ARNTLO00327 626 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 ZNF263O14978 683 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 MSI1O43347 362 aaKnown RBP13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 STC2O76061 302 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 IRF1P10914 325 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 RRM1P23921 792 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 FLT3P36888 993 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 MATKP42679 507 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 RNASE9P60153 205 aaKnown RBP13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 ZXDAP98168 799 aa13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 GFPT1Q06210 699 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-209ENST00000477692 SLC18A3Q16572 532 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms