RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 C6orf52Q5T4I8 152 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 BORAQ6PGQ7 559 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 BBS5Q8N3I7 341 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 PIWIL2Q8TC59 973 aaKnown RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 MMP19Q99542 508 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 HEMK1Q9Y5R4 338 aaPredicted RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 A0A0B4J269 797 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 AVILO75366 819 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 ZFXP17010 805 aaPredicted RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 PTPN7P35236 360 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 NRLP54845 237 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 ZNF252P-AS1Q0IIN9 211 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 TUBB3Q13509 450 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 SMTNL2Q2TAL5 461 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 FAM102BQ5T8I3 360 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 DNAJC24Q6P3W2 148 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 CROCCP3Q8IVE0 287 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 TRIML2Q8N7C3 387 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 CENPOQ9BU64 300 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 LIN28AQ9H9Z2 209 aaKnown RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 NYAP2Q9P242 653 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 PACSIN3Q9UKS6 424 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
DFFB-209ENST00000477548 ITM2BQ9Y287 266 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 ZNF536O15090 1300 aa13.9□□□□□ -0.18
DFFB-209ENST00000477548 ZC3H11AO75152 810 aaKnown RBP eCLIP13.89□□□□□ -0.19
DFFB-209ENST00000477548 RFPL1O75677 317 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 RARRES1P49788 294 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 CYTH1Q15438 398 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 PLA2G4FQ68DD2 849 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 GRAMD4Q6IC98 578 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 ERI1Q8IV48 349 aaKnown RBP13.89□□□□□ -0.19
DFFB-209ENST00000477548 GALNT4Q8N4A0 578 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 COA1Q9GZY4 146 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 TBX20Q9UMR3 447 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 TEX264Q9Y6I9 313 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 ASTN2O75129 1339 aaPredicted RBP13.89□□□□□ -0.19
DFFB-209ENST00000477548 CXorf49A8MYA2 514 aaPredicted RBP13.89□□□□□ -0.19
DFFB-209ENST00000477548 NDUFB10O96000 172 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
DFFB-209ENST00000477548 PHEXP78562 749 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 APOFQ13790 326 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 C16orf72Q14CZ0 275 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 ADRM1Q16186 407 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 PDPK2PQ6A1A2 396 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 FRMD7Q6ZUT3 714 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 MFSD14AQ96MC6 490 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 HERC5Q9UII4 1024 aaKnown RBP13.89□□□□□ -0.19
DFFB-209ENST00000477548 TMEM98Q9Y2Y6 226 aa13.89□□□□□ -0.19
DFFB-209ENST00000477548 TMEM150BA6NC51 233 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 BIRC5O15392 142 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 ITM2AO43736 263 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 KRT38O76015 456 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 OGDHQ02218 1023 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 ARCQ7LC44 396 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 CATSPER1Q8NEC5 780 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 CSRNP1Q96S65 589 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 CCT7Q99832 543 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 ARHGAP26Q9UNA1 814 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 KAT6AQ92794 2004 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 G3V3G9 751 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 RBP3P10745 1247 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 NPR1P16066 1061 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 PORP16435 677 aaPredicted RBP13.88□□□□□ -0.19
DFFB-209ENST00000477548 MTTPP55157 894 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 EIF3EP60228 445 aaKnown RBP13.88□□□□□ -0.19
DFFB-209ENST00000477548 PDK1Q15118 436 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 FASTKD1Q53R41 847 aaKnown RBP13.88□□□□□ -0.19
DFFB-209ENST00000477548 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 MROH9Q5TGP6 573 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 TFB1MQ8WVM0 346 aaKnown RBP13.88□□□□□ -0.19
DFFB-209ENST00000477548 HAUS8Q9BT25 410 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 ST6GALNAC4Q9H4F1 302 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 PLGRKTQ9HBL7 147 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 RRN3Q9NYV6 651 aa13.88□□□□□ -0.19
DFFB-209ENST00000477548 CTDP1Q9Y5B0 961 aaPredicted RBP13.88□□□□□ -0.19
DFFB-209ENST00000477548 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
DFFB-209ENST00000477548 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
DFFB-209ENST00000477548 UGT1A9O60656 530 aa13.87□□□□□ -0.19
DFFB-209ENST00000477548 TOP3BO95985 862 aaKnown RBP13.87□□□□□ -0.19
DFFB-209ENST00000477548 TNNI1P19237 187 aa13.87□□□□□ -0.19
DFFB-209ENST00000477548 STT3AP46977 705 aa13.87□□□□□ -0.19
DFFB-209ENST00000477548 NAA20P61599 178 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms