RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SKILP12757 684 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 PRKCIP41743 596 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 KPNA1P52294 538 aaPredicted RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 SLC6A3Q01959 620 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 CLEC16AQ2KHT3 1053 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 C2CD6Q53TS8 623 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 FAM102AQ5T9C2 384 aaPredicted RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 E4F1Q66K89 784 aaPredicted RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 TRIM68Q6AZZ1 485 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 OLFML1Q6UWY5 402 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 TMC6Q7Z403 805 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 SIX5Q8N196 739 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 SLC30A5Q8TAD4 765 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 SYN2Q92777 582 aaPredicted RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 PCDHB18PQ96TA0 734 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 MFSD1Q9H3U5 465 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 EBF3Q9H4W6 596 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 HEBP1Q9NRV9 189 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 SFMBT1Q9UHJ3 866 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 BZW2Q9Y6E2 419 aaKnown RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 TMEM221A6NGB7 291 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 M0R296 226 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 STK25O00506 426 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 HSF2BPO75031 334 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 GRAP2O75791 330 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 SERPING1P05155 500 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 UNGP13051 313 aaPredicted RBP12.97□□□□□ -0.33
DDX56-209ENST00000473924 MMP8P22894 467 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 GABRB2P47870 512 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ZNF75DP51815 510 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
DDX56-209ENST00000473924 CENPCQ03188 943 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 TNK2Q07912 1038 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 RUNX3Q13761 415 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 TAF5Q15542 800 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 DCAF6Q58WW2 860 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ZNF571Q7Z3V5 609 aaPredicted RBP12.97□□□□□ -0.33
DDX56-209ENST00000473924 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 KIAA1958Q8N8K9 716 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ATP2A3Q93084 1043 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ASIC4Q96FT7 647 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 SHDQ96IW2 340 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 PIWIL1Q96J94 861 aaKnown RBP12.97□□□□□ -0.33
DDX56-209ENST00000473924 FAM83CQ9BQN1 747 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 C11orf70Q9BRQ4 267 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDX56-209ENST00000473924 TRPV5Q9NQA5 729 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ARHGEF3Q9NR81 526 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
DDX56-209ENST00000473924 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 GTSE1Q9NYZ3 720 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 ADAM22Q9P0K1 906 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 TBC1D14Q9P2M4 693 aa12.97□□□□□ -0.33
DDX56-209ENST00000473924 TMCO5BA8MYB1 307 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 ARNTLO00327 626 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 STC2O76061 302 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 NFATC1O95644 943 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 CALB1P05937 261 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 FYNP06241 537 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 ARSAP15289 507 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 CDK17Q00537 523 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 PRKCQQ04759 706 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 NR1H3Q13133 447 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 MLF2Q15773 248 aaPredicted RBP12.96□□□□□ -0.33
DDX56-209ENST00000473924 EML3Q32P44 896 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 ITPRIPL2Q3MIP1 535 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 SYPL2Q5VXT5 272 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 ACAD10Q6JQN1 1059 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 MSANTD2Q6P1R3 559 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 HTR3DQ70Z44 454 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 BEND5Q7L4P6 421 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 SLC26A9Q7LBE3 791 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 XYLT1Q86Y38 959 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 DEFB106AQ8N104 65 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 CPA6Q8N4T0 437 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 PLD4Q96BZ4 506 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 OTUB2Q96DC9 234 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 SERPINB11Q96P15 392 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 C1QTNF1Q9BXJ1 281 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 LINC00597Q9H2U6 94 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 WDR35Q9P2L0 1181 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
DDX56-209ENST00000473924 PIAS3Q9Y6X2 628 aa12.96□□□□□ -0.33
DDX56-209ENST00000473924 TICRRQ7Z2Z1 1910 aa12.96□□□□□ -0.34
DDX56-209ENST00000473924 KRBA1A5PL33 1030 aa12.95□□□□□ -0.34
DDX56-209ENST00000473924 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
DDX56-209ENST00000473924 AKR1B15C9JRZ8 316 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms