RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 C11orf70Q9BRQ4 267 aa12.89□□□□□ -0.35
PRKCB-205ENST00000472066 TRMT61BQ9BVS5 477 aaKnown RBP12.89□□□□□ -0.35
PRKCB-205ENST00000472066 IMPACTQ9P2X3 320 aa12.89□□□□□ -0.35
PRKCB-205ENST00000472066 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
PRKCB-205ENST00000472066 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
PRKCB-205ENST00000472066 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 GREB1Q4ZG55 1949 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 A0A087X0T9 212 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 CAPN9O14815 690 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 HSF2BPO75031 334 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 GRAP2O75791 330 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-205ENST00000472066 CALB1P05937 261 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 FAM228BP0C875 321 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 GPC5P78333 572 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 CDK17Q00537 523 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 USP4Q13107 963 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-205ENST00000472066 FAM102AQ5T9C2 384 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-205ENST00000472066 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 DDX42Q86XP3 938 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRKCB-205ENST00000472066 YAF2Q8IY57 180 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 THG1LQ9NWX6 298 aaKnown RBP12.88□□□□□ -0.35
PRKCB-205ENST00000472066 MARCH2Q9P0N8 246 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 SFMBT1Q9UHJ3 866 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 MUTYHQ9UIF7 546 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 TMEM59LQ9UK28 342 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 STRIP2Q9ULQ0 834 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
PRKCB-205ENST00000472066 SSU72P8A0A1W2PR75 194 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 SLC12A8A0AV02 714 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 ZNF263O14978 683 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 CHADO15335 359 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 HMBSP08397 361 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 IRF1P10914 325 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 GDI1P31150 447 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 NOS2P35228 1153 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 RNASE9P60153 205 aaKnown RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 COG7P83436 770 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 MTF1Q14872 753 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 ASTE1Q2TB18 679 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 DCAF6Q58WW2 860 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 DNAAF5Q86Y56 855 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 KIAA1958Q8N8K9 716 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 DQX1Q8TE96 717 aaKnown RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 WBP2Q969T9 261 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 DEF6Q9H4E7 631 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 NHEJ1Q9H9Q4 299 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-205ENST00000472066 DUSP12Q9UNI6 340 aa12.87□□□□□ -0.35
PRKCB-205ENST00000472066 TCRBV5S1A1TA0A578 114 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 GREM1O60565 184 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 DAB1O75553 588 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 STC2O76061 302 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 SRFP11831 508 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 RRM1P23921 792 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 MATKP42679 507 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 KPNA1P52294 538 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 GFPT1Q06210 699 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 CCDC122Q5T0U0 273 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 ALKBH5Q6P6C2 394 aaKnown RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 HTR3DQ70Z44 454 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 ARCQ7LC44 396 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 UBALD2Q8IYN6 164 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 OSCP1Q8WVF1 389 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 ZFYVE19Q96K21 471 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 CCDC42Q96M95 316 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 LINC00597Q9H2U6 94 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 SLC2A4RGQ9NR83 387 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 DUS2Q9NX74 493 aaKnown RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 NENFQ9UMX5 172 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
PRKCB-205ENST00000472066 HBS1LQ9Y450 684 aaKnown RBP12.86□□□□□ -0.35
PRKCB-205ENST00000472066 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
PRKCB-205ENST00000472066 ARNTLO00327 626 aa12.85□□□□□ -0.35
PRKCB-205ENST00000472066 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms