RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 POMGNT1Q8WZA1 660 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 PRCCQ92733 491 aaPredicted RBP12.73□□□□□ -0.37
LSM2-209ENST00000470083 WBP2Q969T9 261 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 ARID3AQ99856 593 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 TM9SF3Q9HD45 589 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 SIX4Q9UIU6 781 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.73□□□□□ -0.37
LSM2-209ENST00000470083 TCHHQ07283 1943 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.72□□□□□ -0.37
LSM2-209ENST00000470083 DFNA5O60443 496 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 GREM1O60565 184 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 KRT19P08727 400 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 PDGFRBP09619 1106 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 CISD3P0C7P0 127 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 ACADMP11310 421 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 WARSP23381 471 aaKnown RBP12.72□□□□□ -0.37
LSM2-209ENST00000470083 CTSKP43235 329 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 ACADVLP49748 655 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 TOB1P50616 345 aaPredicted RBP12.72□□□□□ -0.37
LSM2-209ENST00000470083 CACNA2D1P54289 1103 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 UCNP55089 124 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 TMPRSS3P57727 454 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 IL9RQ01113 521 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 IFRD2Q12894 506 aaPredicted RBP12.72□□□□□ -0.37
LSM2-209ENST00000470083 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
LSM2-209ENST00000470083 FBXL19Q6PCT2 694 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 USP49Q70CQ1 688 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 HTR3DQ70Z44 454 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 GPBP1Q86WP2 473 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 FBXO18Q8NFZ0 1043 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 FAM84AQ96KN4 292 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 LGMNQ99538 433 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 FAM213AQ9BRX8 229 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 ELOVL4Q9GZR5 314 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 CCSER2Q9H7U1 834 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 TMEM30AQ9NV96 361 aa12.72□□□□□ -0.37
LSM2-209ENST00000470083 TEX15Q9BXT5 2789 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 SYNCRIPO60506 623 aaKnown RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 LDOC1O95751 146 aaPredicted RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 NTRK1P04629 796 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 IRF1P10914 325 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 ST3GAL1Q11201 340 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 DNAJC3Q13217 504 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 LY6DQ14210 128 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 MDH1BQ5I0G3 518 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 LAYNQ6UX15 382 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 TPGS1Q6ZTW0 290 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 NUP93Q8N1F7 819 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 TTC9Q92623 222 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 CNDP2Q96KP4 475 aaKnown RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 MTMR12Q9C0I1 747 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 IKZF4Q9H2S9 585 aa12.71□□□□□ -0.37
LSM2-209ENST00000470083 C6orf106Q9H6K1 298 aaPredicted RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.37
LSM2-209ENST00000470083 RBAKQ9NYW8 714 aaPredicted RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
LSM2-209ENST00000470083 UBR5O95071 2799 aaPredicted RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 PTPRJQ12913 1337 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 COL5A1P20908 1838 aaPredicted RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 A0A1B0GTQ1 180 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 CBX4O00257 560 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 TBCAO75347 108 aaKnown RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 ZDHHC11BP0C7U3 371 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 ACO1P21399 889 aaKnown RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 COPAP53621 1224 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 BROXQ5VW32 411 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 HS2ST1Q7LGA3 356 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 FAM124AQ86V42 546 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 CACTIN-AS1Q8N1I8 211 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 ZNF248Q8NDW4 579 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 TSC1Q92574 1164 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 MED8Q96G25 268 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 ZNF518BQ9C0D4 1074 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 NACA2Q9H009 215 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 ZHX3Q9H4I2 956 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 IGSF5Q9NSI5 407 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 CHORDC1Q9UHD1 332 aaPredicted RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 FBXO10Q9UK96 956 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 SLC27A6Q9Y2P4 619 aa12.7□□□□□ -0.38
LSM2-209ENST00000470083 R3HCC1Q9Y3T6 440 aaKnown RBP12.7□□□□□ -0.38
LSM2-209ENST00000470083 MYH11P35749 1972 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 CD27P26842 260 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 ILKQ13418 452 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 ADAT2Q7Z6V5 191 aaKnown RBP12.69□□□□□ -0.38
LSM2-209ENST00000470083 CACUL1Q86Y37 369 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 GATAD2AQ86YP4 633 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
LSM2-209ENST00000470083 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
LSM2-209ENST00000470083 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms