RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 MARCH2Q9P0N8 246 aa12.21□□□□□ -0.45
CUX1-207ENST00000465461 NDRG2Q9UN36 371 aaKnown RBP12.21□□□□□ -0.45
CUX1-207ENST00000465461 SPECC1L-ADORA2AF8WAN1 911 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 STC2O76061 302 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 FBXO21O94952 628 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 KLKB1P03952 638 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 SKILP12757 684 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 NCAM1P13591 858 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
CUX1-207ENST00000465461 NOMO3P69849 1222 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 PITX1P78337 314 aaPredicted RBP12.2□□□□□ -0.46
CUX1-207ENST00000465461 CDR2Q01850 454 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 ITPRIPL2Q3MIP1 535 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 KLHDC10Q6PID8 442 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 IRF2BP2Q7Z5L9 587 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 BMP8AQ7Z5Y6 402 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 DNAAF5Q86Y56 855 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 ADGRG2Q8IZP9 1017 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 FBXL6Q8N531 539 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 TMEM105Q8N8V8 129 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 TMEM35BQ8NCS4 154 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 IRGQQ8WZA9 623 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 FAM3CQ92520 227 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 SYNCQ9H7C4 482 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 ECT2Q9H8V3 914 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 TRPV5Q9NQA5 729 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 ABCC13Q9NSE7 274 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 RAPGEFL1Q9UHV5 662 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
CUX1-207ENST00000465461 CUL9Q8IWT3 2517 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 KANSL1LA0AUZ9 987 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 E2F8A0AVK6 867 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 FAM170BA6NMN3 283 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 CYP1A1P04798 512 aaPredicted RBP12.19□□□□□ -0.46
CUX1-207ENST00000465461 GLULP15104 373 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 FERP16591 822 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 TARSP26639 723 aaKnown RBP12.19□□□□□ -0.46
CUX1-207ENST00000465461 CTHP32929 405 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 PRKCQQ04759 706 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 PON2Q15165 354 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 DHCR24Q15392 516 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 ASIC2Q16515 512 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 SFMBT2Q5VUG0 894 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
CUX1-207ENST00000465461 RHBDF2Q6PJF5 856 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 ZNF852Q6ZMS4 543 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 HTR3DQ70Z44 454 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 DDX42Q86XP3 938 aaKnown RBP eCLIP12.19□□□□□ -0.46
CUX1-207ENST00000465461 SUGP1Q8IWZ8 645 aaKnown RBP12.19□□□□□ -0.46
CUX1-207ENST00000465461 DEFB106AQ8N104 65 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 ZNF276Q8N554 614 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 GOLGA1Q92805 767 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 AGPAT1Q99943 283 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 DDX23Q9BUQ8 820 aaKnown RBP12.19□□□□□ -0.46
CUX1-207ENST00000465461 FBRSL1Q9HCM7 1045 aaKnown RBP12.19□□□□□ -0.46
CUX1-207ENST00000465461 LTB4R2Q9NPC1 389 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
CUX1-207ENST00000465461 ANTXRLA6NF34 631 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 TRDMT1O14717 391 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 CAPN9O14815 690 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 GJB6O95452 261 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 CYP17A1P05093 508 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 AVPR2P30518 371 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 CORO1AP31146 461 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 GJA4P35212 333 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 SLC6A11P48066 632 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 YWHAZP63104 245 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 SLC6A3Q01959 620 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 FZD5Q13467 585 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 GAB4Q2WGN9 574 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 LY6G5CQ5SRR4 150 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 SMYD5Q6GMV2 418 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 OLFML1Q6UWY5 402 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 Q6ZNB5 142 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 MMS22LQ6ZRQ5 1243 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 TPGS1Q6ZTW0 290 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 TAC4Q86UU9 113 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 ZNF677Q86XU0 584 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 XYLT1Q86Y38 959 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 TMEM25Q86YD3 366 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 DENND1CQ8IV53 801 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 CPA6Q8N4T0 437 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 PJA1Q8NG27 643 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 OLIG1Q8TAK6 271 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 DQX1Q8TE96 717 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 IPO4Q8TEX9 1081 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 BHMTQ93088 406 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 C18orf8Q96DM3 657 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 P2RY11Q96G91 374 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 SHDQ96IW2 340 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms