RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SFMBT2Q5VUG0 894 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 NAA35Q5VZE5 725 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 TRIM72Q6ZMU5 477 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 TPRG1Q6ZUI0 275 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 HTR3DQ70Z44 454 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 ADGRG2Q8IZP9 1017 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 FLCNQ8NFG4 579 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 WBP2Q969T9 261 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 C18orf8Q96DM3 657 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 IQCDQ96DY2 449 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 AGPAT1Q99943 283 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 LRFN3Q9BTN0 628 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 TRIM62Q9BVG3 475 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 C8orf33Q9H7E9 229 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 ECT2Q9H8V3 914 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 TBC1D17Q9HA65 648 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 AIPL1Q9NZN9 384 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 TBC1D14Q9P2M4 693 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 LSM7Q9UK45 103 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 PIAS3Q9Y6X2 628 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 SLC12A8A0AV02 714 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 OTOL1A6NHN0 477 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 MAN2B1O00754 1011 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 CAPN9O14815 690 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 SCAMP3O14828 347 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 STC2O76061 302 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 CYP1A1P04798 512 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 FYNP06241 537 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 GLI1P08151 1106 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 GABRB2P47870 512 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 SLC6A3Q01959 620 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 NR1H3Q13133 447 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ASIC2Q16515 512 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 EFHC1Q5JVL4 640 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 MSANTD2Q6P1R3 559 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ZNF852Q6ZMS4 543 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 FAM183BPQ6ZVS7 135 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 BEND5Q7L4P6 421 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ZDHHC17Q8IUH5 632 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 CPA6Q8N4T0 437 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 FBXL6Q8N531 539 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 MSANTD4Q8NCY6 345 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 CPLX3Q8WVH0 158 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 OTUB2Q96DC9 234 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 MSANTD3Q96H12 275 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 RBSNQ9H1K0 784 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 POPDC2Q9HBU9 364 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 SFMBT1Q9UHJ3 866 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 CAPN11Q9UMQ6 739 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 NAALADL1Q9UQQ1 740 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 COL4A2P08572 1712 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 ITIH6Q6UXX5 1313 aa15.17■□□□□ 0.02
SQSTM1-205ENST00000464493 F5P12259 2224 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 KANSL1LA0AUZ9 987 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 FAM170AA1A519 330 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 SPECC1L-ADORA2AF8WAN1 911 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 GREM1O60565 184 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 NFATC1O95644 943 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 HMBSP08397 361 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 UNGP13051 313 aaPredicted RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 CD72P21854 359 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 SOX9P48436 509 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 CLCN5P51795 746 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 AMPD2Q01433 879 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 TAF5Q15542 800 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 C1orf228Q6PIY5 440 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 OLFML1Q6UWY5 402 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 RALGPS2Q86X27 583 aaPredicted RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 BBS7Q8IWZ6 715 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 SUGP1Q8IWZ8 645 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 FAM3CQ92520 227 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 PIWIL1Q96J94 861 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 NELL2Q99435 816 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 DCLK3Q9C098 648 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 NUCKS1Q9H1E3 243 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 SEPT11Q9NVA2 429 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 ZNF510Q9Y2H8 683 aa15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 MRPS17Q9Y2R5 130 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 HBS1LQ9Y450 684 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-205ENST00000464493 SHISA7A6NL88 538 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 HSF2BPO75031 334 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 GYPCP04921 128 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 TNFAIP3P21580 790 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 CTHP32929 405 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 ZBED6P86452 979 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 TRIP4Q15650 581 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 CLEC16AQ2KHT3 1053 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 C2CD6Q53TS8 623 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 SYPL2Q5VXT5 272 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 CWF19L1Q69YN2 538 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms