RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
CLK1-208ENST00000464454 SCLT1Q96NL6 688 aa4.82□□□□□ -1.64
CLK1-208ENST00000464454 PRR25Q96S07 402 aa4.82□□□□□ -1.64
CLK1-208ENST00000464454 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
CLK1-208ENST00000464454 AS3MTQ9HBK9 375 aa4.82□□□□□ -1.64
CLK1-208ENST00000464454 DACT1Q9NYF0 836 aa4.82□□□□□ -1.64
CLK1-208ENST00000464454 TFCP2L1Q9NZI6 479 aa4.82□□□□□ -1.64
CLK1-208ENST00000464454 A8MVJ9 347 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 AP4M1O00189 453 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 EXOC5O00471 708 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 CES2O00748 559 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 TMPRSS11DO60235 418 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 CCNT2O60583 730 aaKnown RBP4.81□□□□□ -1.64
CLK1-208ENST00000464454 SERPINF1P36955 418 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 GALNT1Q10472 559 aaPredicted RBP4.81□□□□□ -1.64
CLK1-208ENST00000464454 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 C4orf46Q504U0 113 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 HSP90AB4PQ58FF6 505 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 TRIM72Q6ZMU5 477 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 PTCHD4Q6ZW05 846 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 MBD3L2Q8NHZ7 208 aaPredicted RBP4.81□□□□□ -1.64
CLK1-208ENST00000464454 FAM71BQ8TC56 605 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 HASPINQ8TF76 798 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 PPM1EQ8WY54 764 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 ZNF764Q96H86 408 aaPredicted RBP4.81□□□□□ -1.64
CLK1-208ENST00000464454 ZBTB45Q96K62 511 aaPredicted RBP4.81□□□□□ -1.64
CLK1-208ENST00000464454 THAP7Q9BT49 309 aaPredicted RBP4.81□□□□□ -1.64
CLK1-208ENST00000464454 PAGR1Q9BTK6 254 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 MYLK2Q9H1R3 596 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 SH3BP4Q9P0V3 963 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 LRFN1Q9P244 771 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 IGSF9Q9P2J2 1179 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 ADAM21Q9UKJ8 722 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 RIMKLBQ9ULI2 386 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 CA14Q9ULX7 337 aa4.81□□□□□ -1.64
CLK1-208ENST00000464454 COL11A2P13942 1736 aaPredicted RBP4.8□□□□□ -1.64
CLK1-208ENST00000464454 KAT6AQ92794 2004 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 LRRC3CA6NJW4 275 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 AQP12BA6NM10 295 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 H7C1Q1 480 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 SYT5O00445 386 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 ZNF213O14771 459 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 GLP2RO95838 553 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 FGAP02671 866 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 SLC5A2P31639 672 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 CYP4F2P78329 520 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 HOXA4Q00056 320 aaPredicted RBP4.8□□□□□ -1.64
CLK1-208ENST00000464454 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 NSUN2Q08J23 767 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLK1-208ENST00000464454 FOXO1Q12778 655 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 TMEM95Q3KNT9 176 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 ARHGAP15Q53QZ3 475 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 TMTC4Q5T4D3 741 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 NAPRTQ6XQN6 538 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 DPY19L3Q6ZPD9 716 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 ZNF354CQ86Y25 554 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 GATAD2AQ86YP4 633 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 SMAP1Q8IYB5 467 aaPredicted RBP4.8□□□□□ -1.64
CLK1-208ENST00000464454 CACNA2D3Q8IZS8 1091 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 ABHD5Q8WTS1 349 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 LENG8Q96PV6 779 aaPredicted RBP4.8□□□□□ -1.64
CLK1-208ENST00000464454 SNX18Q96RF0 628 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 PRPF18Q99633 342 aaKnown RBP4.8□□□□□ -1.64
CLK1-208ENST00000464454 FER1L4A9Z1Z3 1794 aa4.8□□□□□ -1.64
CLK1-208ENST00000464454 COL15A1P39059 1388 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 CREB1P16220 341 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 PECAM1P16284 738 aaPredicted RBP4.79□□□□□ -1.64
CLK1-208ENST00000464454 FBLP22087 321 aaKnown RBP4.79□□□□□ -1.64
CLK1-208ENST00000464454 MST1P26927 711 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 POLE2P56282 527 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
CLK1-208ENST00000464454 GPS1Q13098 491 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 KIRREL2Q6UWL6 708 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 ZNF788Q6ZQV5 615 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 FSTL5Q8N475 847 aaPredicted RBP4.79□□□□□ -1.64
CLK1-208ENST00000464454 TERB1Q8NA31 727 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 STYXQ8WUJ0 223 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 TRAPPC12Q8WVT3 735 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 REPS1Q96D71 796 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 EID2BQ96D98 161 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 ISCA1Q9BUE6 129 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 CIPCQ9C0C6 399 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 MAGEH1Q9H213 219 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 HELLSQ9NRZ9 838 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 LUZP4Q9P127 313 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 MGAT4CQ9UBM8 478 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 SLC27A6Q9Y2P4 619 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 DTNAQ9Y4J8 743 aa4.79□□□□□ -1.64
CLK1-208ENST00000464454 OR2W5A6NFC9 320 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 UBE2Q2LH0YL09 131 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 AGPSO00116 658 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 ACKR2O00590 384 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 SPRY2O43597 315 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 NTSR2O95665 410 aa4.78□□□□□ -1.64
CLK1-208ENST00000464454 VIPP01282 170 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms