RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SLFN11Q7Z7L1 901 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 LENG9Q96B70 501 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 WNK4Q96J92 1243 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ADNPQ9H2P0 1102 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 TAGLN3Q9UI15 199 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 H3BRB1 525 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 APOC4-APOC2K7ER74 178 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 APOC2P02655 101 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CCDC130P13994 396 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ACADSP16219 412 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PTPN7P35236 360 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ADIGQ0VDE8 80 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 MPP3Q13368 585 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 KCNV1Q6PIU1 500 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 FAM83AQ86UY5 434 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PPHLN1Q8NEY8 458 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 MARK4Q96L34 752 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CCT7Q99832 543 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 UBXN6Q9BZV1 441 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PORCNQ9H237 461 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 TUT1Q9H6E5 874 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 WDCPQ9H6R7 721 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 LRFN2Q9ULH4 789 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CDYLQ9Y232 598 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PPME1Q9Y570 386 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PEX1O43933 1283 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
HPS4-208ENST00000464362 CHRNB2P17787 502 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 HOXD13P35453 343 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 TAF6P49848 677 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PLOD1Q02809 727 aaPredicted RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 TBL3Q12788 808 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 PDK4Q16654 411 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 SGO1Q5FBB7 561 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PDPK2PQ6A1A2 396 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ZDHHC24Q6UX98 284 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 KIAA0319LQ8IZA0 1049 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 SLC2A14Q8TDB8 520 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 MIEF2Q96C03 454 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 B3GNT5Q9BYG0 378 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 RNPEPQ9H4A4 650 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 RHBDL2Q9NX52 303 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PLA2G4CQ9UP65 541 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 hCG_1818297A0A087WSY0 165 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 MAGEA13PA6NCF6 341 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 NCF1BA6NI72 391 aaPredicted RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 NCF1CA8MVU1 366 aaPredicted RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 SMAPO00193 183 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 ENDOD1O94919 500 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 CFHP08603 1231 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 CD48P09326 243 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 NCF1P14598 390 aaPredicted RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 CDK16Q00536 496 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 SLC34A1Q06495 639 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 CSHL1Q14406 222 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 FUT11Q495W5 492 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 PTPN20Q4JDL3 420 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 TNS4Q8IZW8 715 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 ALLCQ8N6M5 410 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 STKLD1Q8NE28 680 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 TCRBV9S1A1TA0A576 114 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 RNF103O00237 685 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 CYB561D2O14569 222 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 LYPLA1O75608 230 aaPredicted RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 SLC1A6P48664 564 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 JAG1P78504 1218 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 FSTL1Q12841 308 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 ANKRD22Q5VYY1 191 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 C16orf87Q6PH81 154 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 TMPRSS6Q8IU80 811 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 DEFB106AQ8N104 65 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 BLOC1S5Q8TDH9 187 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 GCNAQ96QF7 691 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 ABI2Q9NYB9 513 aaPredicted RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 UTP6Q9NYH9 597 aaKnown RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 BARX2Q9UMQ3 279 aaPredicted RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 PCDHA2Q9Y5H9 948 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 ORC6Q9Y5N6 252 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 MYO9BQ13459 2157 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 ACKR2O00590 384 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 EIF4BP23588 611 aaKnown RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 PTGIRP43119 386 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 UBAP2LQ14157 1087 aaKnown RBP9.35□□□□□ -0.91
HPS4-208ENST00000464362 PDK2Q15119 407 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 TAF5Q15542 800 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 DGKDQ16760 1214 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 IMPG1Q17R60 797 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 CYP2R1Q6VVX0 501 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 LGMNQ99538 433 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 VPS33BQ9H267 617 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 CYP39A1Q9NYL5 469 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 SOX13Q9UN79 622 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 NR2E3Q9Y5X4 410 aa9.35□□□□□ -0.91
HPS4-208ENST00000464362 SLIT3O75094 1523 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms