RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 STC2O76061 302 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 CAVIN2O95810 425 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 KRT9P35527 623 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 TCF15Q12870 199 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 NR1H3Q13133 447 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 PDCLQ13371 301 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 DHCR24Q15392 516 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 NAIF1Q69YI7 327 aaPredicted RBP16.6■□□□□ 0.25
ERCC3-206ENST00000462306 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
ERCC3-206ENST00000462306 NEK11Q8NG66 645 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 DDX1Q92499 740 aaKnown RBP16.6■□□□□ 0.25
ERCC3-206ENST00000462306 EDEM1Q92611 657 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 LMAN1LQ9HAT1 526 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 FBRSL1Q9HCM7 1045 aaKnown RBP16.6■□□□□ 0.25
ERCC3-206ENST00000462306 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 OLA1Q9NTK5 396 aaKnown RBP16.6■□□□□ 0.25
ERCC3-206ENST00000462306 MARCH2Q9P0N8 246 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 TJP2Q9UDY2 1190 aa16.6■□□□□ 0.25
ERCC3-206ENST00000462306 LTFP02788 710 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 FYNP06241 537 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 MAGEA9P43362 315 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 COG7P83436 770 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 AMPD2Q01433 879 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 GOLGA8FQ08AF8 430 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 GOLGA8DPQ0D2H9 430 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 CCINQ13939 588 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 TMEM196Q5HYL7 178 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 Q6ZNB5 142 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 NOP9Q86U38 636 aaKnown RBP16.59■□□□□ 0.25
ERCC3-206ENST00000462306 EPS8L1Q8TE68 723 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 PCMTD1Q96MG8 357 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-206ENST00000462306 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-206ENST00000462306 CPXM1Q96SM3 734 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 STRIP2Q9ULQ0 834 aa16.59■□□□□ 0.25
ERCC3-206ENST00000462306 A0A1B0GTH6 734 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 SLC12A8A0AV02 714 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 SART1O43290 800 aaKnown RBP16.58■□□□□ 0.24
ERCC3-206ENST00000462306 GFPT2O94808 682 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 KLKB1P03952 638 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 SOX5P35711 763 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 OPRD1P41143 372 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 GALK1P51570 392 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 LY6G5CQ5SRR4 150 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 FSTL4Q6MZW2 842 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 C1orf131Q8NDD1 294 aaKnown RBP16.58■□□□□ 0.24
ERCC3-206ENST00000462306 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 PPP1R13BQ96KQ4 1090 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 SPAG5Q96R06 1193 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 P2RY13Q9BPV8 354 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 CHRDQ9H2X0 955 aa16.58■□□□□ 0.24
ERCC3-206ENST00000462306 RBM12Q9NTZ6 932 aaKnown RBP16.58■□□□□ 0.24
ERCC3-206ENST00000462306 NOCTQ9UK39 431 aaKnown RBP16.58■□□□□ 0.24
ERCC3-206ENST00000462306 LSM7Q9UK45 103 aaKnown RBP16.58■□□□□ 0.24
ERCC3-206ENST00000462306 ADH1CP00326 375 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 HMBSP08397 361 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-206ENST00000462306 STAT1P42224 750 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 GAS6Q14393 721 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 TRIP4Q15650 581 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-206ENST00000462306 PTPN20Q4JDL3 420 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 FILIP1LQ4L180 1135 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 DGKKQ5KSL6 1271 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 TMEM25Q86YD3 366 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 FMNL3Q8IVF7 1028 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 C1orf210Q8IVY1 113 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 MAML2Q8IZL2 1156 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-206ENST00000462306 CD101Q93033 1021 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 PIWIL1Q96J94 861 aaKnown RBP16.57■□□□□ 0.24
ERCC3-206ENST00000462306 SPHK2Q9NRA0 654 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 SFMBT1Q9UHJ3 866 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
ERCC3-206ENST00000462306 WDFY4Q6ZS81 3184 aa16.57■□□□□ 0.24
ERCC3-206ENST00000462306 CACNA1HO95180 2353 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 MMEP08473 750 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 ADH5P11766 374 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 CHRNB2P17787 502 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 PTPN5P54829 565 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 GRSF1Q12849 480 aaKnown RBP eCLIP16.56■□□□□ 0.24
ERCC3-206ENST00000462306 MTAPQ13126 283 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 LRRC32Q14392 662 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 NR1I3Q14994 352 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 ANGPT1Q15389 498 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 MAMSTRQ6ZN01 415 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 BEND5Q7L4P6 421 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 C12orf40Q86WS4 652 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 TMEM35BQ8NCS4 154 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 SLC20A1Q8WUM9 679 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 EZH1Q92800 747 aaPredicted RBP16.56■□□□□ 0.24
ERCC3-206ENST00000462306 GOLGA1Q92805 767 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 FAM149B1Q96BN6 582 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 PLD4Q96BZ4 506 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 NOX5Q96PH1 765 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 DCLK3Q9C098 648 aa16.56■□□□□ 0.24
ERCC3-206ENST00000462306 A0A1W2PQC6 194 aa16.55■□□□□ 0.24
ERCC3-206ENST00000462306 H0Y858 1186 aa16.55■□□□□ 0.24
ERCC3-206ENST00000462306 HOXC11O43248 304 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms