RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 STX10O60499 249 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 ZNF202O95125 648 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 IRF1P10914 325 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 NTSR1P30989 418 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 DHPSP49366 369 aaPredicted RBP18.82■□□□□ 0.6
SSB-206ENST00000461708 TTC30AQ86WT1 665 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 HMGB4Q8WW32 186 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 BBS2Q9BXC9 721 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 NMUR1Q9HB89 426 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 TMEM9BQ9NQ34 198 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 DNAJC17Q9NVM6 304 aaKnown RBP18.82■□□□□ 0.6
SSB-206ENST00000461708 ANGPTL2Q9UKU9 493 aa18.82■□□□□ 0.6
SSB-206ENST00000461708 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 TCRBV21S2A2A0A5A6 115 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 MAP3K13O43283 966 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 RARGP13631 454 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 TYRP14679 529 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 Q6ZNB5 142 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 SYT12Q8IV01 421 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 FBXL13Q8NEE6 735 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 RLN3Q8WXF3 142 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 CHAMP1Q96JM3 812 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 MBD1Q9UIS9 605 aaPredicted RBP18.81■□□□□ 0.6
SSB-206ENST00000461708 HCN2Q9UL51 889 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 ZNF510Q9Y2H8 683 aa18.81■□□□□ 0.6
SSB-206ENST00000461708 NEDD8-MDP1E9PL57 170 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 RALAP11233 206 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 HOXB2P14652 356 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 CD58P19256 250 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 LMAN2Q12907 356 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 C10orf120Q5SQS8 335 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 PPP1R26Q5T8A7 1209 aaPredicted RBP18.8■□□□□ 0.6
SSB-206ENST00000461708 PEAR1Q5VY43 1037 aaPredicted RBP18.8■□□□□ 0.6
SSB-206ENST00000461708 SDE2Q6IQ49 451 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 SLC36A4Q6YBV0 504 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 SCD5Q86SK9 330 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 PIGKQ92643 395 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 GABRG3Q99928 467 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 GOLPH3LQ9H4A5 285 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 CD248Q9HCU0 757 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 NAGPAQ9UK23 515 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 FBXO10Q9UK96 956 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 PCNX2A6NKB5 2137 aa18.8■□□□□ 0.6
SSB-206ENST00000461708 CACNA1EQ15878 2313 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 A0A1W2PQF6 199 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 GFRA2O00451 464 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 CDX4O14627 284 aaPredicted RBP18.79■□□□□ 0.6
SSB-206ENST00000461708 CETN3O15182 167 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 ZBTB24O43167 697 aaPredicted RBP18.79■□□□□ 0.6
SSB-206ENST00000461708 GABRG2P18507 467 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 CSRP1P21291 193 aaKnown RBP18.79■□□□□ 0.6
SSB-206ENST00000461708 KCNA4P22459 653 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 PTGER3P43115 390 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 MXI1P50539 228 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 COG7P83436 770 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 ARHGAP17Q68EM7 881 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 PGBD3Q8N328 593 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 ARHGAP18Q8N392 663 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 SEMA4DQ92854 862 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 JAKMIP2Q96AA8 810 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 DCLK3Q9C098 648 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 ZDHHC4Q9NPG8 344 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 CISHQ9NSE2 258 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 RMND1Q9NWS8 449 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 RAB20Q9NX57 234 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 FRYQ5TBA9 3013 aa18.79■□□□□ 0.6
SSB-206ENST00000461708 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 TRIM24O15164 1050 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 AP5Z1O43299 807 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 ZNF217O75362 1048 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 STC2O76061 302 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 CISD3P0C7P0 127 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
SSB-206ENST00000461708 CHKAP35790 457 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 DGKGP49619 791 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 IRX4P78413 519 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 LYSMD4Q5XG99 296 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 EGFLAMQ63HQ2 1017 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 SLC23A3Q6PIS1 610 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 MIB1Q86YT6 1006 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 TMEFF1Q8IYR6 380 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 SLC4A11Q8NBS3 891 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 TMEM176AQ96HP8 235 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 HEXIM2Q96MH2 286 aaKnown RBP18.78■□□□□ 0.6
SSB-206ENST00000461708 NUSAP1Q9BXS6 441 aaKnown RBP18.78■□□□□ 0.6
SSB-206ENST00000461708 MMRN2Q9H8L6 949 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 PILRBQ9UKJ0 227 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 SLC27A6Q9Y2P4 619 aa18.78■□□□□ 0.6
SSB-206ENST00000461708 PATE3B3GLJ2 98 aa18.77■□□□□ 0.6
SSB-206ENST00000461708 PRRT4C9JH25 899 aa18.77■□□□□ 0.6
SSB-206ENST00000461708 NPC1O15118 1278 aa18.77■□□□□ 0.6
SSB-206ENST00000461708 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.6
SSB-206ENST00000461708 PENKP01210 267 aaPredicted RBP18.77■□□□□ 0.6
SSB-206ENST00000461708 CEACAM1P13688 526 aa18.77■□□□□ 0.6
SSB-206ENST00000461708 NOVA1P51513 510 aaKnown RBP18.77■□□□□ 0.6
SSB-206ENST00000461708 ZNF132P52740 706 aa18.77■□□□□ 0.6
SSB-206ENST00000461708 RAD23BP54727 409 aa18.77■□□□□ 0.6
SSB-206ENST00000461708 SLC8A3P57103 927 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms