RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MIB1Q86YT6 1006 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 COLGALT2Q8IYK4 626 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 NUP93Q8N1F7 819 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 ELMOD1Q8N336 334 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 FIBCD1Q8N539 461 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 STKLD1Q8NE28 680 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 GSTCDQ8NEC7 633 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM71BQ8TC56 605 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 DIS3LQ8TF46 1054 aaKnown RBP4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 CLEC4CQ8WTT0 213 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 IRGQQ8WZA9 623 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 NDRG1Q92597 394 aaKnown RBP4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 FAF2Q96CS3 445 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 SERPINB11Q96P15 392 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF670Q9BS34 389 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 FOXP3Q9BZS1 431 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 TLR8Q9NR97 1041 aaKnown RBP4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 ABCC13Q9NSE7 274 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 TMEM51Q9NW97 253 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 KLHL8Q9P2G9 620 aaPredicted RBP4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 PCYOX1Q9UHG3 505 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 CDY1Q9Y6F8 540 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC37A2A6NM11 1700 aa4.28□□□□□ -1.72
ATP13A3-206ENST00000461660 MYH10P35580 1976 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 TCRBV7S2A1N4TA0A589 114 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 TYW5A2RUC4 315 aaKnown RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 GOLGA8KD6RF30 607 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 TMEM189-UBE2V1I3L0A0 370 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 APOC4-APOC2K7ER74 178 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 M0QZQ0 153 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 APOC2P02655 101 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 FGBP02675 491 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 GALTP07902 379 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 HMBSP08397 361 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 SRGAP2BP0DMP2 458 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 CSF2RAP15509 400 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 TGM2P21980 687 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP5DP30049 168 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 STIP1P31948 543 aaKnown RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 OR1D2P34982 312 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 PHBP35232 272 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 CDKN2BP42772 138 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 GJA8P48165 433 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 NDUFV1P49821 464 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF135P52742 658 aaPredicted RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC5A3P53794 718 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 EIF3BP55884 814 aaKnown RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 EFEMP1Q12805 493 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 PRPSAP1Q14558 356 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 DDR2Q16832 855 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 DNAJC21Q5F1R6 531 aaKnown RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 SDHAF4Q5VUM1 108 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 KCNT2Q6UVM3 1135 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF771Q7L3S4 317 aaPredicted RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 PALM2Q8IXS6 379 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 VPS52Q8N1B4 723 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 EIF1ADQ8N9N8 165 aaKnown RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 FAM71DQ8N9W8 422 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 OR10T2Q8NGX3 314 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 DYDC1Q8WWB3 177 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF333Q96JL9 665 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 RNF157Q96PX1 679 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 SMOQ99835 787 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 HTATIP2Q9BUP3 242 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 VIPAS39Q9H9C1 493 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 PCDH9Q9HC56 1237 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 PCDH18Q9HCL0 1135 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 GDF3Q9NR23 364 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 MRPL17Q9NRX2 175 aaKnown RBP4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 TRPM5Q9NZQ8 1165 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 PAK5Q9P286 719 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 DNPEPQ9ULA0 475 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 SSX2IPQ9Y2D8 614 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 NR2E1Q9Y466 385 aa4.28□□□□□ -1.73
ATP13A3-206ENST00000461660 SCN10AQ9Y5Y9 1956 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC12A8A0AV02 714 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 YJEFN3A6XGL0 299 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 E7ENQ6 273 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MDM4O15151 490 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 RGS16O15492 202 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 LIASO43766 372 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MAP3K6O95382 1288 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ACSL3O95573 720 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ITGB1P05556 798 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 NEFHP12036 1026 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TCF4P15884 667 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CAPN2P17655 700 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TNFRSF8P28908 595 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ITGA8P53708 1063 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PMS2P54278 862 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 EPHB3P54753 998 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 GSCP56915 257 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 DSC1Q08554 894 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 FAAP100Q0VG06 881 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 AP1B1Q10567 949 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 DUSP4Q13115 394 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MMRN1Q13201 1228 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ZC3H12AQ5D1E8 599 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP1R15BQ5SWA1 713 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms