RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DARS2Q6PI48 645 aaKnown RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 AMIGO2Q86SJ2 522 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 LDHDQ86WU2 507 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 OR5B17Q8NGF7 314 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 LZICQ8WZA0 190 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 HSPH1Q92598 858 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CALN1Q9BXU9 219 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MRPS26Q9BYN8 205 aaKnown RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ZC3H12CQ9C0D7 883 aaKnown RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 IFT122Q9HBG6 1241 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 POPDC2Q9HBU9 364 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 TIMMDC1Q9NPL8 285 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 RAB6BQ9NRW1 208 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CCNL1Q9UK58 526 aaPredicted RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ITGA11Q9UKX5 1188 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 AK5Q9Y6K8 562 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MCF2LO15068 1137 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 DCXO43602 365 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 FBXO21O94952 628 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CCNE2O96020 404 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CALB1P05937 261 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CDH2P19022 906 aaPredicted RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 FUT4P22083 530 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CRHR1P34998 444 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 SLC1A6P48664 564 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ATXN3P54252 364 aaPredicted RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MTTPP55157 894 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CLDN10P78369 228 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MRPS9P82933 396 aaKnown RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CDKL1Q00532 357 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 PPIDQ08752 370 aaKnown RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MTMR1Q13613 665 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 PDK1Q15118 436 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 SEZ6Q53EL9 994 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 TRAPPC3LQ5T215 181 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MBLAC2Q68D91 279 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 PDPK2PQ6A1A2 396 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 GPAT2Q6NUI2 795 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF554Q86TJ5 538 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF410Q86VK4 478 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 C4orf19Q8IY42 314 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 GALNT4Q8N4A0 578 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 KCTD6Q8NC69 237 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ZBTB45Q96K62 511 aaPredicted RBP10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CSRNP1Q96S65 589 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 HAPLN2Q9GZV7 340 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MAN1C1Q9NR34 630 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 TBC1D22BQ9NU19 505 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF180Q9UJW8 692 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 NFIBO00712 420 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 EXTL3O43909 919 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 LYPLA2O95372 231 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 TNFAIP8O95379 198 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 FGF3P11487 239 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 GMPRP36959 345 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 HDAC4P56524 1084 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 RPL26P61254 145 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 MRPS22P82650 360 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 SFSWAPQ12872 951 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 CBX3Q13185 183 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 KRT81Q14533 505 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 PSMD6Q15008 389 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 HSP90AA5PQ58FG0 334 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 PPP6R3Q5H9R7 873 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 CAND1Q86VP6 1230 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 NIPA2Q8N8Q9 360 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 CERKQ8TCT0 537 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 DIS3LQ8TF46 1054 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 IRGQQ8WZA9 623 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 TMIGD2Q96BF3 282 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 ZFRQ96KR1 1074 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 NLRP4Q96MN2 994 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 PNPLA8Q9NP80 782 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 SLC17A6Q9P2U8 582 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 CEPT1Q9Y6K0 416 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 COL16A1Q07092 1604 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 H0YIN7 160 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 BIRC5O15392 142 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 ZBTB14O43829 449 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 SPAG6O75602 509 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 STAM2O75886 525 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 KRT38O76015 456 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 APOC2P02655 101 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 ATP5BP06576 529 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 GARTP22102 1010 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 PRKCHP24723 683 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 VARSP26640 1264 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 STT3AP46977 705 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 SERPINB8P50452 374 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 ROR1Q01973 937 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 SMAD1Q15797 465 aaKnown RBP10.66□□□□□ -0.7
CLIP4-208ENST00000456385 FAM182BQ5T319 152 aa10.66□□□□□ -0.7
CLIP4-208ENST00000456385 LGSNQ5TDP6 509 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms