RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MRPL47Q9HD33 250 aaKnown RBP14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 MARCH2Q9P0N8 246 aa14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 INTUQ9ULD6 942 aa14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 STAP1Q9ULZ2 295 aa14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 CPQQ9Y646 472 aa14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 SCINQ9Y6U3 715 aa14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 TTC28Q96AY4 2481 aa14.95□□□□□ -0.02
HMGXB4-204ENST00000455359 TCRBV5S1A1TA0A578 114 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 NRDCO43847 1150 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 IPO7O95373 1038 aaKnown RBP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 TBX18O95935 607 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 H2AFZP0C0S5 128 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 RRM1P23921 792 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 FCARP24071 287 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 GPC5P78333 572 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 MTA1Q13330 715 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 H2AFVQ71UI9 128 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 EDEM1Q92611 657 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 NT5C3BQ969T7 300 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 PIWIL1Q96J94 861 aaKnown RBP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 PDLIM2Q96JY6 352 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 SERPINB11Q96P15 392 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 DDX23Q9BUQ8 820 aaKnown RBP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 SELENOOQ9BVL4 669 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 KLF16Q9BXK1 252 aaPredicted RBP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 SMOC2Q9H3U7 446 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 THG1LQ9NWX6 298 aaKnown RBP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 CNOT8Q9UFF9 292 aaKnown RBP14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 EYSQ5T1H1 3165 aa14.94□□□□□ -0.02
HMGXB4-204ENST00000455359 E2F8A0AVK6 867 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 HEPACAM2A8MVW5 462 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 EIF3CLB5ME19 914 aaKnown RBP14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 GOLGA8SH3BPF8 625 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 PRAMEF12O95522 483 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 F9P00740 461 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 GBP1P32455 592 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 FCHO2Q0JRZ9 810 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 EFEMP1Q12805 493 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 MAMLD1Q13495 774 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 SPA17Q15506 151 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 TAF5Q15542 800 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 ZNF77Q15935 545 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 C2CD6Q53TS8 623 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 DCAF6Q58WW2 860 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 PPP1R15BQ5SWA1 713 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 TANGO2Q6ICL3 276 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 PARM1Q6UWI2 310 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 MFSD6LQ8IWD5 586 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 DEFB106AQ8N104 65 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 BPIFB1Q8TDL5 484 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 DQX1Q8TE96 717 aaKnown RBP14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 PLD4Q96BZ4 506 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 ZNF653Q96CK0 615 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 PGAP3Q96FM1 320 aaPredicted RBP14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 ZFRQ96KR1 1074 aaKnown RBP14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 EIF3CQ99613 913 aaKnown RBP14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 DCLK3Q9C098 648 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 KCNK12Q9HB15 430 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 LIMD1Q9UGP4 676 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 LCMT1Q9UIC8 334 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 NAALADL1Q9UQQ1 740 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 ZNF510Q9Y2H8 683 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 EPN1Q9Y6I3 576 aaPredicted RBP14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 NUMBLQ9Y6R0 609 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 NOTCH4Q99466 2003 aa14.93□□□□□ -0.02
HMGXB4-204ENST00000455359 LEFTY2O00292 366 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC9A3R1O14745 358 aaPredicted RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 IGLV3-25P01717 112 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 CYP1A2P05177 515 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TMEM253P0C7T8 217 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC2A3P11169 496 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 DESP17661 470 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 PSMC3P17980 439 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 RING1Q06587 406 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 USP4Q13107 963 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TRIP4Q15650 581 aaPredicted RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SYPL2Q5VXT5 272 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 DCUN1D2Q6PH85 259 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TMEM139Q8IV31 216 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 GJD3Q8N144 294 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TXLNBQ8N3L3 684 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SH3RF2Q8TEC5 729 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 FNIP1Q8TF40 1166 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 CTNNBL1Q8WYA6 563 aaPredicted RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 FGF14Q92915 247 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 OTUB2Q96DC9 234 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 NPY6RQ99463 290 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TBC1D14Q9P2M4 693 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 UVRAGQ9P2Y5 699 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 RASAL2Q9UJF2 1139 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TLR6Q9Y2C9 796 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 PAXBP1Q9Y5B6 917 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 PATJQ8NI35 1801 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 NCOR1O75376 2440 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC12A8A0AV02 714 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 C2CD4BA6NLJ0 364 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 GRAP2O75791 330 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 NDUFA10O95299 355 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms