RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CDH16O75309 829 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 STIP1P31948 543 aaKnown RBP14.2□□□□□ -0.14
CLK3-203ENST00000454830 SYPL2Q5VXT5 272 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 SCN4BQ8IWT1 228 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLK3-203ENST00000454830 CFAP36Q96G28 342 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 CEP41Q9BYV8 373 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 FRMD8P1Q9BZ68 369 aaPredicted RBP14.2□□□□□ -0.14
CLK3-203ENST00000454830 SLC12A6Q9UHW9 1150 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 IKBKGQ9Y6K9 419 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 TMEM120BA0PK00 339 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 SPAG7O75391 227 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 KIAA0319Q5VV43 1072 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 C3orf62Q6ZUJ4 267 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 EXOC3L1Q86VI1 746 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 FBXO36Q8NEA4 188 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 ZNF473Q8WTR7 871 aaKnown RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 TTC25Q96NG3 672 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 FAM193BQ96PV7 902 aaPredicted RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 XPO6Q96QU8 1125 aaKnown RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 FOXP3Q9BZS1 431 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 STARD7Q9NQZ5 370 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 DDIT4Q9NX09 232 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 NKIRAS1Q9NYS0 192 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 DDX20Q9UHI6 824 aaKnown RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 MAD1L1Q9Y6D9 718 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 MRPL42Q9Y6G3 142 aaKnown RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 BRCA2P51587 3418 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 DPYSL4O14531 572 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 NDC80O14777 642 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 ATP2A2P16615 1042 aaKnown RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 HOXC8P31273 242 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 GLB1LQ6UWU2 654 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 CTAGE3PQ8IX95 158 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 KCTD15Q96SI1 283 aaPredicted RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 TSPAN18Q96SJ8 248 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 SRRDQ9UH36 339 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 F8W810 466 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 PHBP35232 272 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 PTPN9P43378 593 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 OR1G1P47890 313 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 ARPP19P56211 112 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 AP1B1Q10567 949 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 EFHC2Q5JST6 749 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 FNBP1LQ5T0N5 605 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 HEATR6Q6AI08 1181 aaKnown RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 ARHGEF18Q6ZSZ5 1173 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 CYP4V2Q6ZWL3 525 aaPredicted RBP14.19□□□□□ -0.14
CLK3-203ENST00000454830 CEP57Q86XR8 500 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 PQLC3Q8N755 202 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 MYLPFQ96A32 169 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLK3-203ENST00000454830 MFHAS1Q9Y4C4 1052 aa14.19□□□□□ -0.14
CLK3-203ENST00000454830 YJEFN3A6XGL0 299 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 E7ENQ6 273 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 NRP1O14786 923 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 AVILO75366 819 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 TMEM63AO94886 807 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 GBP2P32456 591 aaPredicted RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 RAB27AP51159 221 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 SEPT7Q16181 437 aaKnown RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 OVOS1Q6IE37 1185 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 KCNT2Q6UVM3 1135 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 CYP4X1Q8N118 509 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 TMEM86AQ8N2M4 240 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 KLC2Q9H0B6 622 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 UPF3AQ9H1J1 476 aaKnown RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 ZKSCAN8Q15776 578 aaPredicted RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 SMAD1Q15797 465 aaKnown RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 CASC4Q6P4E1 433 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 TEKT4Q8WW24 435 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 MYO18AQ92614 2054 aaKnown RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 IL4RP24394 825 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 L1CAMP32004 1257 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 STX2P32856 288 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 TSPY1Q01534 308 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 SLC25A52Q3SY17 297 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 PAQR9Q6ZVX9 377 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 ABI1Q8IZP0 508 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 C4orf33Q8N1A6 199 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 THEM5Q8N1Q8 247 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 ATP11CQ8NB49 1132 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 CSPG4P5Q96PW8 444 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 ZNF670Q9BS34 389 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 POPDC2Q9HBU9 364 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 ETNK2Q9NVF9 386 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 PAK5Q9P286 719 aa14.18□□□□□ -0.14
CLK3-203ENST00000454830 RRP15Q9Y3B9 282 aaKnown RBP14.18□□□□□ -0.14
CLK3-203ENST00000454830 A0A0U1RQF3 1178 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 MDM4O15151 490 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 TGM2P21980 687 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 NOS2P35228 1153 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 MSS51Q4VC12 460 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 GPRIN1Q7Z2K8 1008 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 CDKL3Q8IVW4 592 aaPredicted RBP14.17□□□□□ -0.14
CLK3-203ENST00000454830 SMOQ99835 787 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 SIK2Q9H0K1 926 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 OR4Q2P0C623 313 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 RPL9P32969 192 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms