RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 WNT6Q9Y6F9 365 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 GREM1O60565 184 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 MLLT6P55198 1093 aaPredicted RBP29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 YWHAZP63104 245 aaKnown RBP29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 COG7P83436 770 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 TNK2Q07912 1038 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 MLF2Q15773 248 aaPredicted RBP29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 EML3Q32P44 896 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 OLFML1Q6UWY5 402 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 HTR3DQ70Z44 454 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 ZDHHC17Q8IUH5 632 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 VSTM4Q8IW00 320 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 ZNF397Q8NF99 534 aaPredicted RBP29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 SYN2Q92777 582 aaPredicted RBP29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 FAM149B1Q96BN6 582 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 C18orf8Q96DM3 657 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 TRIM62Q9BVG3 475 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 EBF3Q9H4W6 596 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 ASNSD1Q9NWL6 643 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 GTSE1Q9NYZ3 720 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 STRIP2Q9ULQ0 834 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 SH3BP1Q9Y3L3 701 aa29.27■■■□□ 2.28
SMARCC1-203ENST00000454240 GLI1P08151 1106 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 IRF1P10914 325 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 IFNAR2P48551 515 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 PRKCQQ04759 706 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 GOLGA8FQ08AF8 430 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 GOLGA8DPQ0D2H9 430 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 RUNX3Q13761 415 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 CLEC16AQ2KHT3 1053 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 EFHC1Q5JVL4 640 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 OR6B2Q6IFH4 312 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 OLIG1Q8TAK6 271 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 POPDC2Q9HBU9 364 aa29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 LUC7L2Q9Y383 392 aaKnown RBP29.26■■■□□ 2.27
SMARCC1-203ENST00000454240 COL4A3Q01955 1670 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 FAM86C2PA6NEL3 165 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 SLC9A3R1O14745 358 aaPredicted RBP29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 STC2O76061 302 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 NCAM1P13591 858 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 GLULP15104 373 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 ARSAP15289 507 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 STARD6P59095 220 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 SLC6A3Q01959 620 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 CENPCQ03188 943 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 TAF5Q15542 800 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 MSANTD4Q8NCY6 345 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 TRIM5Q9C035 493 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 HAUS4Q9H6D7 363 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 TBC1D14Q9P2M4 693 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 SFMBT1Q9UHJ3 866 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 NAALADL1Q9UQQ1 740 aa29.25■■■□□ 2.27
SMARCC1-203ENST00000454240 SLC12A8A0AV02 714 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 OTOL1A6NHN0 477 aaPredicted RBP29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 SHISA7A6NL88 538 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 PDGFBP01127 241 aaPredicted RBP29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 MMP8P22894 467 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 CASP14P31944 242 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 ITPRIPL2Q3MIP1 535 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 TOGARAM2Q6ZUX3 1019 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 SLC26A9Q7LBE3 791 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 XYLT1Q86Y38 959 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 ADGRG2Q8IZP9 1017 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 SLC30A5Q8TAD4 765 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 ATP2A3Q93084 1043 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 SHDQ96IW2 340 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 DDX23Q9BUQ8 820 aaKnown RBP29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 HBS1LQ9Y450 684 aaKnown RBP29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 MYOFQ9NZM1 2061 aa29.24■■■□□ 2.27
SMARCC1-203ENST00000454240 FAM170AA1A519 330 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 SCAMP3O14828 347 aaKnown RBP29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 HSF2BPO75031 334 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 TNFAIP3P21580 790 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 SCNN1AP37088 669 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 KLHL30Q0D2K2 578 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 TRIM14Q14142 442 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 C2CD6Q53TS8 623 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 SYPL2Q5VXT5 272 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 ZNF571Q7Z3V5 609 aaPredicted RBP29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 PBXIP1Q96AQ6 731 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 OTUB2Q96DC9 234 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 SLC2A13Q96QE2 648 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 C8orf33Q9H7E9 229 aaPredicted RBP29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 ECT2Q9H8V3 914 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 SEPT11Q9NVA2 429 aaKnown RBP29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 PIAS3Q9Y6X2 628 aa29.23■■■□□ 2.27
SMARCC1-203ENST00000454240 PRR33A8MZF0 331 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 CAPN9O14815 690 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 PTP4A2Q12974 167 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 TRIP4Q15650 581 aaPredicted RBP29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 TMEM31Q5JXX7 168 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 HGSNATQ68CP4 663 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 Q6ZNB5 142 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 TPRG1Q6ZUI0 275 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 PHF13Q86YI8 300 aaPredicted RBP29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 BBS7Q8IWZ6 715 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 TTC8Q8TAM2 541 aa29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 DQX1Q8TE96 717 aaKnown RBP29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 LSM7Q9UK45 103 aaKnown RBP29.22■■■□□ 2.27
SMARCC1-203ENST00000454240 NFATC1O95644 943 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms