RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ZNF184Q99676 751 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 ROGDIQ9GZN7 287 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PRDM5Q9NQX1 630 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 COMMD8Q9NX08 183 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 VTI1BQ9UEU0 232 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 DAPK2Q9UIK4 370 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 MYRFQ9Y2G1 1151 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 FRMPD1Q5SYB0 1578 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ALKQ9UM73 1620 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 IQCA1LA6NCM1 817 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 AP1G2O75843 785 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CBX6O95503 412 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 IFNA14P01570 189 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 JCHAINP01591 159 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 MPOP05164 745 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PECAM1P16284 738 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 CCT8P50990 548 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 BCAT1P54687 386 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CYP24A1Q07973 514 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 VAC14Q08AM6 782 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ATP1A4Q13733 1029 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 C1DQ13901 141 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 TRIM71Q2Q1W2 868 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 CCDC153Q494R4 210 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 FAM98BQ52LJ0 330 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 PRMT9Q6P2P2 845 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 FAM131BQ86XD5 332 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 DHFR2Q86XF0 187 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ERO1BQ86YB8 467 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CLVS1Q8IUQ0 354 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 MCOLN2Q8IZK6 566 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 EMC1Q8N766 993 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF75CPQ92670 426 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 SRPK1Q96SB4 655 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 KCTD14Q9BQ13 255 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 OSBPL10Q9BXB5 764 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 MYLK2Q9H1R3 596 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 VTA1Q9NP79 307 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CISHQ9NSE2 258 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CACNA2D2Q9NY47 1150 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 POLG2Q9UHN1 485 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 DIP2BQ9P265 1576 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 E9PCH4 1651 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 QRICH2Q9H0J4 1663 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MAGEB16A2A368 324 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 LDLRP01130 860 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 C6orf222P0C671 652 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RARAP10276 462 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RAG1P15918 1043 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TCF7P36402 384 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CAPZA2P47755 286 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ELF3P78545 371 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ORC1Q13415 861 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TCHHL1Q5QJ38 904 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RSBN1Q5VWQ0 802 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 FAM45BPQ6NSW5 357 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MPZL3Q6UWV2 235 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NT5DC3Q86UY8 548 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MYO1HQ8N1T3 1032 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TSEN2Q8NCE0 465 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 KIAA0895Q8NCT3 520 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ATG4CQ96DT6 458 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 DCUN1D5Q9BTE7 237 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SLC7A5P2Q9GIP4 190 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RNPEPL1Q9HAU8 725 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CNGB3Q9NQW8 809 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 DDX18Q9NVP1 670 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 C6orf203Q9P0P8 240 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SH3BP1Q9Y3L3 701 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NCF1BA6NI72 391 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SRRM3A6NNA2 597 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NCF1CA8MVU1 366 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 PHGDHO43175 533 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 DDHD2O94830 711 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MED26O95402 600 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 EIF2S1P05198 315 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ICAM1P05362 532 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NCF1P14598 390 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 HOXD10P28358 340 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SSTR1P30872 391 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TALDO1P37837 337 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CDK16Q00536 496 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CDC16Q13042 620 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TRIM25Q14258 630 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MEA1Q16626 185 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 FGD2Q7Z6J4 655 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 C11orf74Q86VG3 221 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 DNAAF5Q86Y56 855 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 COLGALT1Q8NBJ5 622 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 OR6Y1Q8NGX8 325 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CEP44Q9C0F1 390 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ELP3Q9H9T3 547 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CYP3A43Q9HB55 503 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 PCDHA3Q9Y5H8 950 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 PRRG1O14668 218 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NCAM2O15394 837 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 HSMCR30P0CW71 290 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ALADP13716 330 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms