RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MON1AQ86VX9 555 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 TPX2Q9ULW0 747 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 NCAM2O15394 837 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 TTI1O43156 1089 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 FGF19O95750 216 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 COPS2P61201 443 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 TARBP2Q15633 366 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 RASSF3Q86WH2 238 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 MFN1Q8IWA4 741 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 LZTR1Q8N653 840 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 ACBD6Q9BR61 282 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 VPS11Q9H270 941 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 FLRT1Q9NZU1 646 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 VANGL2Q9ULK5 521 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 STX7O15400 261 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 JCHAINP01591 159 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 CSF2RAP15509 400 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 TAC1P20366 129 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 SLC8A1P32418 973 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 NSUN2Q08J23 767 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 ZC3H12AQ5D1E8 599 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 MYCBPAPQ8TBZ2 947 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 INTS9Q9NV88 658 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 RRP15Q9Y3B9 282 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 PKP3Q9Y446 797 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 TBC1D3BA6NDS4 549 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 NRP1O14786 923 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 RALBP11234 206 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 C11orf63Q6NUN7 778 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 TRIM54Q9BYV2 358 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 XPO7Q9UIA9 1087 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 CAPN6Q9Y6Q1 641 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 A0A087WUV0 522 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 MAP3K7O43318 606 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 LZTS3O60299 673 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 CCT5P48643 541 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 ZNF135P52742 658 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 TERF2Q15554 542 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 FAM183BPQ6ZVS7 135 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 LINC00523Q86TU6 105 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 VSIG1Q86XK7 387 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 CCDC33Q8N5R6 958 aa14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 SPDYE1Q8NFV5 336 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 CELF6Q96J87 481 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-204ENST00000444061 SIGLEC16A6NMB1 481 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 SCAMP3O14828 347 aaKnown RBP14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 CILPO75339 1184 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 GJB6O95452 261 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 ATP5BP06576 529 aaKnown RBP14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 ACADMP11310 421 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 ITIH2P19823 946 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 MIPP30301 263 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 ADSSP30520 456 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 OTUD4Q01804 1114 aaKnown RBP14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 SF3A3Q12874 501 aaKnown RBP eCLIP14.58□□□□□ -0.073e-6■■■■■ 28.1
SMARCA4-204ENST00000444061 TRIM51Q9BSJ1 452 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 RNF39Q9H2S5 420 aa14.58□□□□□ -0.07
SMARCA4-204ENST00000444061 MYO9BQ13459 2157 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 SMAPO00193 183 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 SNX2O60749 519 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 NDUFS3O75489 264 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 FDFT1P37268 417 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 PLA2G4AP47712 749 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 PMS2P54278 862 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 TTC30BQ8N4P2 665 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 SCUBE2Q9NQ36 999 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 L1RE1Q9UN81 338 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 SQORQ9Y6N5 450 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 FAM47DPA6NHR8 397 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 PBX3P40426 434 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 IRX4P78413 519 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 CACNA2D3Q8IZS8 1091 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 ABCB6Q9NP58 842 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 PDE4DIPQ5VU43 2346 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 ADGRA3Q8IWK6 1321 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 SPTLC1O15269 473 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 MAP3K13O43283 966 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 TAF10Q12962 218 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 TSNAXIP1Q2TAA8 658 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 ZCWPW2Q504Y3 356 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 MARC1Q5VT66 337 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 CDCA2Q69YH5 1023 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 DMAC2Q9NW81 257 aa14.58□□□□□ -0.08
SMARCA4-204ENST00000444061 CCL16O15467 120 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 SEC31AO94979 1220 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 RPL17P18621 184 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 JAMLQ86YT9 394 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 N4BP2L2Q92802 583 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 RABEP2Q9H5N1 569 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 SMARCAL1Q9NZC9 954 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 ZC3H7BQ9UGR2 993 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 AAR2Q9Y312 384 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 COPEO14579 308 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 EPHB6O15197 1021 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 ATP4AP20648 1035 aa14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 TKTP29401 623 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 SH3BGRP55822 239 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 MRPS5P82675 430 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-204ENST00000444061 GPR158Q5T848 1215 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms