RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 UBE2Q2LH0YL09 131 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 USP1O94782 785 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 CSF1RP07333 972 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 CHRM5P08912 532 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 CYP2A6P11509 494 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 POLGP54098 1239 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 MYO1EQ12965 1108 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 DEPDC1Q5TB30 811 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 SERPINA13PQ6UXR4 307 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 CELF5Q8N6W0 485 aaKnown RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 NANOGP1Q8N7R0 232 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 OSCP1Q8WVF1 389 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 LENG8Q96PV6 779 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 DPCDQ9BVM2 203 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 CIPCQ9C0C6 399 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 EPHX3Q9H6B9 360 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 TRNAU1APQ9NX07 287 aaKnown RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 TMX2Q9Y320 296 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 AFG3L2Q9Y4W6 797 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 QSER1Q2KHR3 1735 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 LRRIQ1Q96JM4 1722 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 PLXNC1O60486 1568 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 SPTAN1Q13813 2472 aaKnown RBP3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 TMEM2Q9UHN6 1383 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 PAPPAQ13219 1627 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 FNDC1Q4ZHG4 1894 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 KALRNO60229 2985 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ARHGAP5Q13017 1502 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 INSIG1O15503 277 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 PRKCBP05771 671 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 CYP2C9P11712 490 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ATP5F1P24539 256 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 AKAP5P24588 427 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 IL1R2P27930 398 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ADORA2AP29274 412 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 RENBPP51606 427 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ALDH5A1P51649 535 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 UCP3P55916 312 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 KRT17Q04695 432 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 RNASE12Q5GAN4 147 aaKnown RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZNF280BQ86YH2 543 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 IZUMO1Q8IYV9 350 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 PIGOQ8TEQ8 1089 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 MTFMTQ96DP5 389 aaKnown RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZC3H10Q96K80 434 aaKnown RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 FAM118BQ9BPY3 351 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 MESP1Q9BRJ9 268 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 CXorf36Q9H7Y0 433 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 ARMT1Q9H993 441 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 TFCP2L1Q9NZI6 479 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 CPA4Q9UI42 421 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 SCAF8Q9UPN6 1271 aaKnown RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 MED16Q9Y2X0 877 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 LUC7L2Q9Y383 392 aaKnown RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 PHRF1Q9P1Y6 1649 aaKnown RBP3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 CACNA1IQ9P0X4 2223 aa3.62□□□□□ -1.83
HMGB1P18-201ENST00000438801 YTHDC2Q9H6S0 1430 aaKnown RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 PEAK1Q9H792 1746 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 ADGRL2O95490 1459 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 TCRBV5S1A1TA0A578 114 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 MYO1CO00159 1063 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 AP4M1O00189 453 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 SOCS2O14508 198 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 FCHO1O14526 889 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 FGBP02675 491 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 ALDH2P05091 517 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 THP07101 528 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 VCAM1P19320 739 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 FPR3P25089 353 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 SLC11A2P49281 568 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 DGKEP52429 567 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 WNT3P56703 355 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 E2F1Q01094 437 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 LRRC41Q15345 812 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CYP1B1Q16678 543 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 LY6KQ17RY6 165 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZIK1Q3SY52 487 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 MGAT5BQ3V5L5 792 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CRELD2Q6UXH1 353 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZNF813Q6ZN06 617 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 MRPL10Q7Z7H8 261 aaKnown RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CAND1Q86VP6 1230 aaKnown RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 ABRAQ8N0Z2 381 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 PLBD2Q8NHP8 589 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 WASF1Q92558 559 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CHMP4CQ96CF2 233 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 MAP3K14Q99558 947 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CGRRF1Q99675 332 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CNNM1Q9NRU3 951 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 TRMT13Q9NUP7 481 aaKnown RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 HDAC9Q9UKV0 1011 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 SNX14Q9Y5W7 946 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CFAP65Q6ZU64 1925 aaKnown RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 CNOT1A5YKK6 2376 aaKnown RBP3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 OVOS2A0A0G2JMS6 1433 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 OVOS2A0A0J9YW53 1432 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 OVOS2Q6IE36 1432 aa3.61□□□□□ -1.83
HMGB1P18-201ENST00000438801 NUP153P49790 1475 aaKnown RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 C1orf167Q5SNV9 1468 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 878.6 ms