RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 OGFRL1Q5TC84 451 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GTF2IRD2BQ6EKJ0 949 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KIAA1841Q6NSI8 718 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RGS9BPQ6ZS82 235 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GTF2IRD2Q86UP8 949 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CCDC36Q8IYA8 594 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PHTF2Q8N3S3 785 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ZNF565Q8N9K5 539 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 TPCN2Q8NHX9 752 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KBTBD7Q8WVZ9 684 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 TRUB1Q8WWH5 349 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 FUBP1Q96AE4 644 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GRAMD1AQ96CP6 724 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 TXNDC15Q96J42 360 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RPRD1AQ96P16 312 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SERPINB12Q96P63 405 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KATNAL1Q9BW62 490 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 DCLK3Q9C098 648 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RPF2Q9H7B2 306 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GPAMQ9HCL2 828 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GRHL1Q9NZI5 618 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 VPS54Q9P1Q0 977 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 AMACRQ9UHK6 382 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CNOT7Q9UIV1 285 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SMG5Q9UPR3 1016 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 NR2E1Q9Y466 385 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GOLGA8QA0A0J9YX86 632 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GOLGA8OA6NCC3 632 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 LGALS16A8MUM7 142 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RSPH10B2B2RC85 870 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KCNJ18B7U540 433 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GOLGA8NF8WBI6 632 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 H3BMQ9 156 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GOLGA8RI6L899 631 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PSMD12O00232 456 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KRIT1O00522 736 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CES2O00748 559 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RGS16O15492 202 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 BUB1O43683 1085 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 MAGEC1O60732 1142 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SORBS2O94875 1100 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 FTCDO95954 541 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PRLP01236 227 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ERBB2P04626 1255 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CAPNS1P04632 268 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 C8BP07358 591 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RSPH10BP0C881 870 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CPB1P15086 417 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RPA1P27694 616 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CIITAP33076 1130 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 FDFT1P37268 417 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PSEN2P49810 448 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 NPEPPSP55786 919 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 NUP107P57740 925 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SRP54P61011 504 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 YWHAGP61981 247 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GSTO1P78417 241 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CDKL1Q00532 357 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GHRHRQ02643 423 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KCNJ12Q14500 433 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 KRT81Q14533 505 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ZNF124Q15973 351 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SWI5Q1ZZU3 235 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ZACNQ401N2 412 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 MMEL1Q495T6 779 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SLC45A4Q5BKX6 768 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 FGD3Q5JSP0 725 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 FAM182AQ5T1J6 154 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 IQSEC1Q6DN90 963 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PLBD1Q6P4A8 553 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 BTNL9Q6UXG8 535 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PPP1R21Q6ZMI0 780 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 MTDHQ86UE4 582 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 NT5DC4Q86YG4 428 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 SNX29P2Q8IUI4 249 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 LRRC71Q8N4P6 559 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ZNF276Q8N554 614 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 PIP4K2CQ8TBX8 421 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 DHX38Q92620 1227 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 TRIM47Q96LD4 638 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CCDC138Q96M89 665 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 COG8Q96MW5 612 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 C17orf62Q9BQA9 187 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 TRIM51Q9BSJ1 452 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 DNAI2Q9GZS0 605 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ANKRD2Q9GZV1 360 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 GTF2IRD1Q9UHL9 959 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 DNMT3LQ9UJW3 386 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 CPSF3Q9UKF6 684 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 APPL1Q9UKG1 709 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ACOT9Q9Y305 439 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 RNF11Q9Y3C5 154 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 ZNF609O15014 1411 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 FER1L6Q2WGJ9 1857 aa4.53□□□□□ -1.68
R3HDM1-206ENST00000429703 WDR91A4D1P6 747 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 FAM205CA6NFA0 338 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 C2CD2LO14523 706 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 RIPK2O43353 540 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms