RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 EXOC3O60645 756 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 LILRA1O75019 489 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 CLSTN1O94985 981 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 USP17L7P0C7H9 530 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 TMEM191BP0C7N4 346 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 CEACAM1P13688 526 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 MZF1P28698 734 aaPredicted RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 POLR2BP30876 1174 aaKnown RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 GGCXP38435 758 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 SNRPFP62306 86 aaKnown RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 MESP2Q0VG99 397 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 ACAP1Q15027 740 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 SNRNP35Q16560 246 aaKnown RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 NFE2Q16621 373 aaPredicted RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 USP39Q53GS9 565 aaKnown RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 TRIM61Q5EBN2 209 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 CRELD2Q6UXH1 353 aaPredicted RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 C11orf74Q86VG3 221 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 TTC30AQ86WT1 665 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 CBWD2Q8IUF1 395 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 SMYD4Q8IYR2 804 aaPredicted RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 FRMD1Q8N878 549 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 XXYLT1Q8NBI6 393 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 ZSWIM2Q8NEG5 633 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 ERCC4Q92889 916 aaPredicted RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 EXOC4Q96A65 974 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 MYRFLQ96LU7 910 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 TIGD1Q96MW7 591 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 LINC00597Q9H2U6 94 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 KIAA1586Q9HCI6 787 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 ABCB6Q9NP58 842 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 FSCN3Q9NQT6 498 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 DDX43Q9NXZ2 648 aaKnown RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 CGNQ9P2M7 1197 aaKnown RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 UXTQ9UBK9 157 aaPredicted RBP8.79□□□□□ -1
UPF3AP1-201ENST00000413731 KLK13Q9UKR3 277 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 MMP17Q9ULZ9 603 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 ARHGAP26Q9UNA1 814 aa8.79□□□□□ -1
UPF3AP1-201ENST00000413731 SPAARA0A1B0GVQ0 90 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 RNF223E7ERA6 249 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 GOLGA6L22H0YM25 854 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 NFATC1O95644 943 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 TNNC2P02585 160 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 NR3C1P04150 777 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 CYP17A1P05093 508 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ITGB3P05106 788 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 PTGER3P43115 390 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 RPL10AP62906 217 aaKnown RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ZXDBP98169 803 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 POU5F1Q01860 360 aaKnown RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 KDSRQ06136 332 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 RING1Q06587 406 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 STIM1Q13586 685 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 SURF1Q15526 300 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 CRY1Q16526 586 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 C11orf91Q3C1V1 193 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 C12orf40Q86WS4 652 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 SCN4BQ8IWT1 228 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ADGRF2Q8IZF7 708 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ALLCQ8N6M5 410 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 C1orf127Q8N9H9 656 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 OLIG1Q8TAK6 271 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 CXorf38Q8TB03 319 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 CCDC127Q96BQ5 260 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ANKRD36BP1Q96IX9 119 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 GSDMAQ96QA5 445 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 FNBP1Q96RU3 617 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ACBD6Q9BR61 282 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 PDE11AQ9HCR9 933 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ZDHHC4Q9NPG8 344 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 EVLQ9UI08 416 aaPredicted RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 MBD1Q9UIS9 605 aaPredicted RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 GTF3C4Q9UKN8 822 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 R3HCC1Q9Y3T6 440 aaKnown RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 TP53BP1Q12888 1972 aaPredicted RBP8.78□□□□□ -1
UPF3AP1-201ENST00000413731 APC2O95996 2303 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 DMXL2Q8TDJ6 3036 aa8.78□□□□□ -1
UPF3AP1-201ENST00000413731 ANKRD11Q6UB99 2663 aaPredicted RBP8.77□□□□□ -1
UPF3AP1-201ENST00000413731 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 SGK1O00141 431 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 LEFTY2O00292 366 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 PDXKO00764 312 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 KLF8O95600 359 aaPredicted RBP8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 ADH1CP00326 375 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 IL2RAP01589 272 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 PDGFAP04085 211 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 KRT19P08727 400 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 DLATP10515 647 aaKnown RBP8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 ENGP17813 658 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 NR2F2P24468 414 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 GNA15P30679 374 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 P2RY2P41231 377 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 PNPLA4P41247 253 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 PSMC1P62191 440 aaKnown RBP8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 MYL7Q01449 175 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 CYP24A1Q07973 514 aa8.77□□□□□ -1.01
UPF3AP1-201ENST00000413731 LMAN2Q12907 356 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms