RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 CASP10Q92851 521 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 CYP2S1Q96SQ9 504 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 DDX23Q9BUQ8 820 aaKnown RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 MAGEB5Q9BZ81 275 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 ABCC13Q9NSE7 274 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 ATG2AQ2TAZ0 1938 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 A0A1W2PPC1 479 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 ZNF840PA6NDX5 716 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 TLR5O60602 858 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 GLP2RO95838 553 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 IL1R2P27930 398 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 MIPP30301 263 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 CCR2P41597 374 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 HDAC4P56524 1084 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 PIGHQ14442 188 aaPredicted RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 SLC25A52Q3SY17 297 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 C10orf120Q5SQS8 335 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 GRASPQ7Z6J2 395 aaPredicted RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 ITIH5Q86UX2 942 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 SYCE1Q8N0S2 351 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 DQX1Q8TE96 717 aaKnown RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 RNF139Q8WU17 664 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 TLR10Q9BXR5 811 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 NSUN3Q9H649 340 aaKnown RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 FAM204AQ9H8W3 233 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 PIGVQ9NUD9 493 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 AMFRQ9UKV5 643 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 RNF8O76064 485 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 GLI1P08151 1106 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 HMBSP08397 361 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 TXNDC8Q6A555 127 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 FNIP1Q8TF40 1166 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 NACA2Q9H009 215 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
PMS1-204ENST00000409823 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 DNMT3BQ9UBC3 853 aaKnown RBP13.13□□□□□ -0.31
PMS1-204ENST00000409823 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 JRKLQ9Y4A0 524 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
PMS1-204ENST00000409823 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 CTAGE9A4FU28 777 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 SCAMP3O14828 347 aaKnown RBP13.13□□□□□ -0.31
PMS1-204ENST00000409823 TRUB2O95900 331 aaKnown RBP13.13□□□□□ -0.31
PMS1-204ENST00000409823 SCNN1AP37088 669 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 AADACL2Q6P093 401 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 ALG3Q92685 438 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 SLC22A12Q96S37 553 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 PEBP4Q96S96 227 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 NPY6RQ99463 290 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.13□□□□□ -0.31
PMS1-204ENST00000409823 STAP1Q9ULZ2 295 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 MYO16Q9Y6X6 1858 aa13.13□□□□□ -0.31
PMS1-204ENST00000409823 ZNF185O15231 689 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 DEUP1Q05D60 604 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 ZNF211Q13398 564 aaPredicted RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 SLC5A9Q2M3M2 681 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 SCML4Q8N228 414 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 HSPH1Q92598 858 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 NAPGQ99747 312 aaPredicted RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 USP18Q9UMW8 372 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 MTCH2Q9Y6C9 303 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 KCNK3O14649 394 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 RHOP08100 348 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 GGCXP38435 758 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 KCNC3Q14003 757 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 RPS6KA1Q15418 735 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 RARS2Q5T160 578 aaKnown RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 CCDC185Q8N715 623 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 RNF34Q969K3 372 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 NT5C3BQ969T7 300 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 TRMT2BQ96GJ1 504 aaKnown RBP13.12□□□□□ -0.31
PMS1-204ENST00000409823 LRRC3Q9BY71 257 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 ANLNQ9NQW6 1124 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
PMS1-204ENST00000409823 PI4K2BG5E9Z4 385 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 COCHO43405 550 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms