RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 KANSL1LA0AUZ9 987 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 SHISA7A6NL88 538 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 STK25O00506 426 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 GREM1O60565 184 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 CHRNB2P17787 502 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 CLCN5P51795 746 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 FMO1Q01740 532 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 CWF19L1Q69YN2 538 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 ASTLQ6HA08 431 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 BEND5Q7L4P6 421 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 RALGPS2Q86X27 583 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 ADGRG2Q8IZP9 1017 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 CPA6Q8N4T0 437 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 TTC8Q8TAM2 541 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 IPO4Q8TEX9 1081 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 WBP2Q969T9 261 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 FAM149B1Q96BN6 582 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 OTUB2Q96DC9 234 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 XPO4Q9C0E2 1151 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 ECT2Q9H8V3 914 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 RASAL2Q9UJF2 1139 aa20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 MRPS17Q9Y2R5 130 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-207ENST00000409417 SCAMP3O14828 347 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 NFATC1O95644 943 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 ERBB2P04626 1255 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 FYNP06241 537 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 IRF1P10914 325 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 CTHP32929 405 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 SOX9P48436 509 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 YWHAZP63104 245 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 MSANTD2Q6P1R3 559 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 TRIM72Q6ZMU5 477 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 IQCDQ96DY2 449 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 NELL2Q99435 816 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 LSM7Q9UK45 103 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 LRRC53A6NM62 1247 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 SPECC1L-ADORA2AF8WAN1 911 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 CBFA2T2O43439 604 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 STC2O76061 302 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 CYP1A1P04798 512 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 GLI1P08151 1106 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 NCAM1P13591 858 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 CD72P21854 359 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 GABRB2P47870 512 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 NOMO3P69849 1222 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 AMPD2Q01433 879 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 NR1H3Q13133 447 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 NAA35Q5VZE5 725 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 ERICH1Q86X53 443 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 ZDHHC17Q8IUH5 632 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 CPA5Q8WXQ8 436 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 FOXQ1Q9C009 403 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 ASNSD1Q9NWL6 643 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 AIPL1Q9NZN9 384 aa20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 HBS1LQ9Y450 684 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-207ENST00000409417 TICRRQ7Z2Z1 1910 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 COL4A2P08572 1712 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 A0A1W2PQJ5 194 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 SLC12A8A0AV02 714 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 AOC1P19801 751 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 EFHC1Q5JVL4 640 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 SFMBT2Q5VUG0 894 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 OLFML1Q6UWY5 402 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 Q6ZNB5 142 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 BBS7Q8IWZ6 715 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 MSANTD4Q8NCY6 345 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 PJA1Q8NG27 643 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 FAM3CQ92520 227 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 C18orf8Q96DM3 657 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 PIWIL1Q96J94 861 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 OSBPL6Q9BZF3 934 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 POPDC2Q9HBU9 364 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 LTB4R2Q9NPC1 389 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 SFMBT1Q9UHJ3 866 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 NAALADL1Q9UQQ1 740 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 SIT1Q9Y3P8 196 aa20.74■□□□□ 0.91
PDLIM2-207ENST00000409417 KLKB1P03952 638 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 SLC6A3Q01959 620 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 TAF5Q15542 800 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 OR6B2Q6IFH4 312 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 TOGARAM2Q6ZUX3 1019 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 FAM183BPQ6ZVS7 135 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 PLD4Q96BZ4 506 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 PCDHB18PQ96TA0 734 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 AGPAT1Q99943 283 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 DCLK3Q9C098 648 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 ZNF510Q9Y2H8 683 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 ITIH6Q6UXX5 1313 aa20.73■□□□□ 0.91
PDLIM2-207ENST00000409417 FAM170BA6NMN3 283 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 CAPN9O14815 690 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 PI15O43692 258 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 HSF2BPO75031 334 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 CYP17A1P05093 508 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 AVPR2P30518 371 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 GJA4P35212 333 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 UBXN2BQ14CS0 331 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 DHCR24Q15392 516 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 TRIP4Q15650 581 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 SYPL2Q5VXT5 272 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms