RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MAP7D3Q8IWC1 876 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 SCN4BQ8IWT1 228 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 PRELID2Q8N945 189 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 KCTD6Q8NC69 237 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 MAGOHBQ96A72 148 aaKnown RBP21.9■■□□□ 1.1
TPM1-208ENST00000404484 HERC2P3Q9BVR0 1158 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 TLR9Q9NR96 1032 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 CHST7Q9NS84 486 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 KLHL11Q9NVR0 708 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 PLXNA4Q9HCM2 1894 aa21.89■■□□□ 1.1
TPM1-208ENST00000404484 PI4K2BG5E9Z4 385 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 MDM4O15151 490 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 RARAP10276 462 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 KDELR1P24390 212 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 CDKN2BP42772 138 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 FNTAP49354 379 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 SLC5A3P53794 718 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 HDAC4P56524 1084 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 KLF1Q13351 362 aaPredicted RBP21.89■■□□□ 1.09
TPM1-208ENST00000404484 PDK2Q15119 407 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 PSMD5Q16401 504 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 SMTNL2Q2TAL5 461 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 SH3PXD2AQ5TCZ1 1133 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 SLC8B1Q6J4K2 584 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 SCYL2Q6P3W7 929 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 VSIG1Q86XK7 387 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 MICAL1Q8TDZ2 1067 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 RIN2Q8WYP3 895 aaPredicted RBP21.89■■□□□ 1.09
TPM1-208ENST00000404484 RAPGEF5Q92565 580 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 NT5C3BQ969T7 300 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 PNKPQ96T60 521 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 FBXO44Q9H4M3 255 aa21.89■■□□□ 1.09
TPM1-208ENST00000404484 hCG_1818297A0A087WSY0 165 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 YJEFN3A6XGL0 299 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 E7ENQ6 273 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 RAD51CO43502 376 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 ARPP19P56211 112 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 SIX1Q15475 284 aaPredicted RBP21.88■■□□□ 1.09
TPM1-208ENST00000404484 TAZQ16635 292 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 KCNT1Q5JUK3 1230 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 TAS1R1Q7RTX1 841 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 NDRG1Q92597 394 aaKnown RBP21.88■■□□□ 1.09
TPM1-208ENST00000404484 HSPH1Q92598 858 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 PEBP4Q96S96 227 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 NPY6RQ99463 290 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 LRRC19Q9H756 370 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 TMEM51Q9NW97 253 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 NR2E1Q9Y466 385 aa21.88■■□□□ 1.09
TPM1-208ENST00000404484 TCRBV7S2A1N4TA0A589 114 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 MTMR11A4FU01 709 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 FAM187AA6NFU0 413 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 TNFRSF10BO14763 440 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 ENDOD1O94919 500 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 HEXIM1O94992 359 aaKnown RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 RDXP35241 583 aaKnown RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 GLUD2P49448 558 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 TFF2Q03403 129 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 FBXO38Q6PIJ6 1188 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 ADGRD2Q7Z7M1 963 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 PSTKQ8IV42 348 aaKnown RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 IFT20Q8IY31 132 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 NUP93Q8N1F7 819 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 HLA-CQ95604 372 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 CEP295NLQ96MC4 621 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 PGLYRP2Q96PD5 576 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 HEMGNQ9BXL5 484 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.87■■□□□ 1.09
TPM1-208ENST00000404484 PCYOX1Q9UHG3 505 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 FEZ2Q9UHY8 353 aaPredicted RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 RASAL2Q9UJF2 1139 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 C3orf70A6NLC5 250 aaPredicted RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 VSNL1P62760 191 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 RPL10AP62906 217 aaKnown RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 DR1Q01658 176 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 DSG1Q02413 1049 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 HYAL1Q12794 435 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 KRT81Q14533 505 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 MAP9Q49MG5 647 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 ERMARDQ5T6L9 678 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 PRSS55Q6UWB4 352 aaPredicted RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 CYP4V2Q6ZWL3 525 aaPredicted RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 BHLHA9Q7RTU4 235 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 DDX53Q86TM3 631 aaKnown RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 GPR65Q8IYL9 337 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 ARHGAP18Q8N392 663 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 ACSF2Q96CM8 615 aaPredicted RBP21.87■■□□□ 1.09
TPM1-208ENST00000404484 TCF25Q9BQ70 676 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 COMMD8Q9NX08 183 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 THEGQ9P2T0 379 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 AMACRQ9UHK6 382 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 CDY1Q9Y6F8 540 aa21.87■■□□□ 1.09
TPM1-208ENST00000404484 ATG2AQ2TAZ0 1938 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.86■■□□□ 1.09
TPM1-208ENST00000404484 ZNF487B1APH4 448 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 RTN3O95197 1032 aaPredicted RBP21.86■■□□□ 1.09
TPM1-208ENST00000404484 F9P00740 461 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 URODP06132 367 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 NCAM1P13591 858 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 TNFRSF8P28908 595 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 AIF1P55008 147 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms