RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP34.8■■■■□ 3.161e-8■■□□□ 12.8
CSNK1E-204ENST00000403904 CTTNBP2NLQ9P2B4 639 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 DENND4AQ7Z401 1863 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 MDM4O15151 490 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 MATKP42679 507 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 ARL14EPQ8N8R7 260 aaPredicted RBP34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 FGF13Q92913 245 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 ZSWIM3Q96MP5 696 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 TRIM7Q9C029 511 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 LACRTQ9GZZ8 138 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 TASP1Q9H6P5 420 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 NPAS3Q8IXF0 933 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 ZNF276Q8N554 614 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 SLC35G2Q8TBE7 412 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 RXFP2Q8WXD0 754 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 NACA2Q9H009 215 aa34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP34.79■■■■□ 3.16
CSNK1E-204ENST00000403904 TMEM191CA6NGB0 347 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 C2CD4BA6NLJ0 364 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 CCDC175P0C221 793 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 PDGFRAP16234 1089 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 HDCP19113 662 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 DDX6P26196 483 aaKnown RBP eCLIP34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 NOS2P35228 1153 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 ATP5C1P36542 298 aaKnown RBP34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 TFF2Q03403 129 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 EFEMP1Q12805 493 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 LEXMQ3ZCV2 418 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 GADD45GIP1Q8TAE8 222 aaPredicted RBP34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 OSGEPQ9NPF4 335 aa34.78■■■■□ 3.16
CSNK1E-204ENST00000403904 PITX1P78337 314 aaPredicted RBP34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 TADA2BQ86TJ2 420 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 ZNF564Q8TBZ8 553 aaPredicted RBP34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 ADAM32Q8TC27 787 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 DQX1Q8TE96 717 aaKnown RBP34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 RFFLQ8WZ73 363 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 CFAP57Q96MR6 1250 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 CDK5RAP1Q96SZ6 601 aaKnown RBP34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 DDX23Q9BUQ8 820 aaKnown RBP34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 OLA1Q9NTK5 396 aaKnown RBP34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 UVRAGQ9P2Y5 699 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 SFMBT1Q9UHJ3 866 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 DUSP10Q9Y6W6 482 aa34.77■■■■□ 3.16
CSNK1E-204ENST00000403904 DOCK8Q8NF50 2099 aa34.76■■■■□ 3.16
CSNK1E-204ENST00000403904 TRAV19A0A0A6YYK7 116 aa34.76■■■■□ 3.16
CSNK1E-204ENST00000403904 PJA2O43164 708 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 OLFM2O95897 454 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 CKMP06732 381 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 GPD1P21695 349 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 OGDHQ02218 1023 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 MIB1Q86YT6 1006 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 RHOT2Q8IXI1 618 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 CMTM8Q8IZV2 173 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 RASAL2Q9UJF2 1139 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 DNMT3LQ9UJW3 386 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 ANAPC7Q9UJX3 599 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 PYCARDQ9ULZ3 195 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 PPP2R2CQ9Y2T4 447 aa34.75■■■■□ 3.15
CSNK1E-204ENST00000403904 TFE3P19532 575 aaPredicted RBP34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 CCDC14Q49A88 953 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 MSANTD2Q6P1R3 559 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 KLHDC10Q6PID8 442 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 BTBD6Q96KE9 485 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 MYADMQ96S97 322 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 ADAM33Q9BZ11 813 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 MARCH2Q9P0N8 246 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 CDH7Q9ULB5 785 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 STAP1Q9ULZ2 295 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 SOBPA7XYQ1 873 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 MBL2P11226 248 aaPredicted RBP34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 SDC4P31431 198 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 GBP2P32456 591 aaPredicted RBP34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 AVPR1AP37288 418 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 KIF5AQ12840 1032 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 SLC25A52Q3SY17 297 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 TAC4Q86UU9 113 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 TXLNBQ8N3L3 684 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 NPY6RQ99463 290 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 SMG9Q9H0W8 520 aaKnown RBP34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 SMOC2Q9H3U7 446 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 TRIM10Q9UDY6 481 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 SALL4Q9UJQ4 1053 aa34.74■■■■□ 3.15
CSNK1E-204ENST00000403904 PFKLP17858 780 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 SULT1E1P49888 294 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 ZNF143P52747 638 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 ATP11AP98196 1134 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 C15orf59Q2T9L4 293 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 PTCRAQ6ISU1 281 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 NT5C3BQ969T7 300 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 TBCBQ99426 244 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 SMPD4Q9NXE4 827 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 GDE1Q9NZC3 331 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 ZMYM5Q9UJ78 669 aa34.73■■■■□ 3.15
CSNK1E-204ENST00000403904 SYNJ2BP-COX16A0A087WUM0 186 aa34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 MSI1O43347 362 aaKnown RBP34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 TRUB2O95900 331 aaKnown RBP34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 SP100P23497 879 aaPredicted RBP34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 NOP2P46087 812 aaKnown RBP34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 OTUD1Q5VV17 481 aaPredicted RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms