RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZDHHC5Q9C0B5 715 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ELOVL4Q9GZR5 314 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SDCBP2Q9H190 292 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 XYLT2Q9H1B5 865 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MIR1-1HGQ9H1L0 117 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SNX25Q9H3E2 840 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ITM2CQ9NQX7 267 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 OLFML3Q9NRN5 406 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PLK2Q9NYY3 685 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 EHD2Q9NZN4 543 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SUSD2Q9UGT4 822 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CLEC4EQ9ULY5 219 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 EXOC7Q9UPT5 735 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 RAI2Q9Y5P3 530 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 STON1Q9Y6Q2 735 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MUC22E2RYF6 1773 aaPredicted RBP12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MYLKQ15746 1914 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TLX3O43711 291 aaPredicted RBP12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GNSP15586 552 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GAP43P17677 238 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GJB2P29033 226 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MATKP42679 507 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 IL12RB1P42701 662 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TUBP50607 506 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TPMTP51580 245 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 COPAP53621 1224 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ENPP2Q13822 863 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 KIF19Q2TAC6 998 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PCSK4Q6UW60 755 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 LAYNQ6UX15 382 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GPRIN1Q7Z2K8 1008 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SYCP3Q8IZU3 236 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 RASSF8Q8NHQ8 419 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PIP4K2CQ8TBX8 421 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PLEKHO2Q8TD55 490 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 RHBDD1Q8TEB9 315 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SMOQ99835 787 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PRORYQ9H606 182 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SMYD3Q9H7B4 428 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 EIF2B4Q9UI10 523 aaKnown RBP12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 NFE2L3Q9Y4A8 694 aa12.59□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZNF233A6NK53 670 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 MEI4A8MW99 385 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 A8MXQ7 604 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 GFRA2O00451 464 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 BCAT2O15382 392 aaPredicted RBP12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TLR5O60602 858 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TNNC2P02585 160 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PLA2G2AP14555 144 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 MYL6P60660 151 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 WDR72Q3MJ13 1102 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 Q6ZNB5 142 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 WDR49Q8IV35 697 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FUKQ8N0W3 1084 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 BOD1L1Q8NFC6 3051 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CADM4Q8NFZ8 388 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 HSPBP1Q9NZL4 362 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FBXO2Q9UK22 296 aaPredicted RBP12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 NUDT5Q9UKK9 219 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PCDHGB2Q9Y5G2 931 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SNX11Q9Y5W9 270 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CLIC4Q9Y696 253 aa12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TP53BP1Q12888 1972 aaPredicted RBP12.58□□□□□ -0.4
SPTLC1P3-201ENST00000403408 EIF4E1BA6NMX2 242 aaKnown RBP12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TGFB1I1O43294 461 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 IGLV3-19P01714 112 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 KLKB1P03952 638 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 IDEP14735 1019 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 PRKCHP24723 683 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 DGKGP49619 791 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 MFAP3P55082 362 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ORC1Q13415 861 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TMEM215Q68D42 235 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 DHRS13Q6UX07 377 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 CACUL1Q86Y37 369 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 TMPRSS6Q8IU80 811 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SCFD1Q8WVM8 642 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 SORCS1Q8WY21 1168 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 UBL7Q96S82 380 aaPredicted RBP12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 ORAI3Q9BRQ5 295 aa12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 C6orf106Q9H6K1 298 aaPredicted RBP12.57□□□□□ -0.4
SPTLC1P3-201ENST00000403408 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms