RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 TTC39BQ5VTQ0 682 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CGB2Q6NT52 195 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ADGRD1Q6QNK2 874 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 KCNT2Q6UVM3 1135 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ANKRD23Q86SG2 305 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PRPF39Q86UA1 669 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CDKL3Q8IVW4 592 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PLD5Q8N7P1 536 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GPRC5AQ8NFJ5 357 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CMASQ8NFW8 434 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CFAP61Q8NHU2 1237 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 FNIP1Q8TF40 1166 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CDKL2Q92772 493 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ATP2A3Q93084 1043 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SRPK1Q96SB4 655 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 TMEM120AQ9BXJ8 343 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 MAGEB5Q9BZ81 275 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 MROH8Q9H579 483 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 IFT122Q9HBG6 1241 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GRID1Q9ULK0 1009 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 AP4E1Q9UPM8 1137 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CXCL11O14625 94 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 C22orf31O95567 290 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 RARBP10826 455 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 EDNRBP24530 442 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ACAT1P24752 427 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SULT1E1P49888 294 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SLC6A3Q01959 620 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GBE1Q04446 702 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 NOL9Q5SY16 702 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 TWF2Q6IBS0 349 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CES3Q6UWW8 571 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 TDRPQ86YL5 185 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CRLF3Q8IUI8 442 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SMC1BQ8NDV3 1235 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 AGR3Q8TD06 166 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CLEC4CQ8WTT0 213 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 EZH1Q92800 747 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 MCRS1Q96EZ8 462 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SERAC1Q96JX3 654 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 FRMD8P1Q9BZ68 369 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 VPS11Q9H270 941 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PCDH18Q9HCL0 1135 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ETNK2Q9NVF9 386 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ITGA11Q9UKX5 1188 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 POLR2AP24928 1970 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 FAM237BA0A1B0GVD1 139 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 C2CD4BA6NLJ0 364 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 TM9SF1O15321 606 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 UGT1A9O60656 530 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CYP2C9P11712 490 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CDH5P33151 784 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SERPINB4P48594 390 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ALDH18A1P54886 795 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 USP4Q13107 963 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PDK2Q15119 407 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CCDC14Q49A88 953 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CFAP157Q5JU67 520 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ATG16L1Q676U5 607 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 IFNLR1Q8IU57 520 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 RELL1Q8IUW5 271 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 SIX6OS1Q8N1H7 587 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 E2F7Q96AV8 911 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PGBD4Q96DM1 585 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 DPEP3Q9H4B8 488 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 UGT1A7Q9HAW7 530 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 UGT1A10Q9HAW8 530 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 UGT1A8Q9HAW9 530 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GOLGA2P5Q9HBQ8 144 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 KLHL8Q9P2G9 620 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 TUBGCP4Q9UGJ1 667 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 EFR3BQ9Y2G0 817 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 MRPL42Q9Y6G3 142 aaKnown RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 CYB561D2O14569 222 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 FAM189A1O60320 539 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 ENTPD5O75356 428 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 SNAPC2Q13487 334 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 ACAP1Q15027 740 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 ZRSR2Q15696 482 aaKnown RBP7.96□□□□□ -1.13
HDAC9-201ENST00000401921 PRAMEF19Q5SWL8 479 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 C16orf46Q6P387 395 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 TLDC1Q6P9B6 456 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 MTHFD1LQ6UB35 978 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 UBR7Q8N806 425 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 MAB21L3Q8N8X9 362 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 PCDH19Q8TAB3 1148 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 ADAM32Q8TC27 787 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 BCO2Q9BYV7 579 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 SHCBP1LQ9BZQ2 653 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 KIAA1257Q9ULG3 409 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 FARP1Q9Y4F1 1045 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-201ENST00000401921 PPME1Q9Y570 386 aa7.96□□□□□ -1.13
HDAC9-201ENST00000401921 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 TCRBV5S1A1TA0A578 114 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 B2RBV5 119 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 SMAPO00193 183 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 ATP9BO43861 1147 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms