RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 IL4RP24394 825 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 RXRBP28702 533 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 CPOXP36551 454 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 HPS6Q86YV9 775 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 NGRNQ9NPE2 291 aaKnown RBP21.75■■□□□ 1.07
CTCF-202ENST00000401394 SLC15A5A6NIM6 579 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 HOXC6P09630 235 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 PHKA2P46019 1235 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 PAOXQ6QHF9 649 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 CMASQ8NFW8 434 aaPredicted RBP21.75■■□□□ 1.07
CTCF-202ENST00000401394 GPRASP2Q96D09 838 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 PSAT1Q9Y617 370 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 TXNDC9O14530 226 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 PGM3O95394 542 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 NAMPTP43490 491 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 MSLNQ13421 630 aaPredicted RBP21.75■■□□□ 1.07
CTCF-202ENST00000401394 PQLC3Q8N755 202 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 NSUN6Q8TEA1 469 aaKnown RBP21.75■■□□□ 1.07
CTCF-202ENST00000401394 RXFP2Q8WXD0 754 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 EPAS1Q99814 870 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 ADPGKQ9BRR6 497 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 KCNK4Q9NYG8 393 aa21.75■■□□□ 1.07
CTCF-202ENST00000401394 RPL26L1Q9UNX3 145 aaKnown RBP21.75■■□□□ 1.07
CTCF-202ENST00000401394 MSCO60682 206 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 HNRNPCL1O60812 293 aaKnown RBP21.74■■□□□ 1.07
CTCF-202ENST00000401394 MICAL2O94851 1124 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 GSRP00390 522 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 PRKG1Q13976 671 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 DUOXA2Q1HG44 320 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 MAP1SQ66K74 1059 aaPredicted RBP21.74■■□□□ 1.07
CTCF-202ENST00000401394 MFN1Q8IWA4 741 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 PHTF2Q8N3S3 785 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 PLD5Q8N7P1 536 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 PPP1R14CQ8TAE6 165 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 PGBD4Q96DM1 585 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 OPHN1O60890 802 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 LSM8O95777 96 aaKnown RBP21.74■■□□□ 1.07
CTCF-202ENST00000401394 NFICP08651 508 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 NOMO1Q15155 1222 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 TMEM132AQ24JP5 1023 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 SLFN12LQ6IEE8 588 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 RASSF3Q86WH2 238 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 EGFL6Q8IUX8 553 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.74■■□□□ 1.07
CTCF-202ENST00000401394 NLRP4Q96MN2 994 aa21.74■■□□□ 1.07
CTCF-202ENST00000401394 RTN3O95197 1032 aaPredicted RBP21.73■■□□□ 1.07
CTCF-202ENST00000401394 PDGFRAP16234 1089 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 CYP3A5P20815 502 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 STIP1P31948 543 aaKnown RBP21.73■■□□□ 1.07
CTCF-202ENST00000401394 RPS6KA3P51812 740 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 GBE1Q04446 702 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 FASTKD1Q53R41 847 aaKnown RBP21.73■■□□□ 1.07
CTCF-202ENST00000401394 OR6B2Q6IFH4 312 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 CRLF3Q8IUI8 442 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 B3GNT5Q9BYG0 378 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 SIRPGQ9P1W8 387 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 FETUBQ9UGM5 382 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 SIX4Q9UIU6 781 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 ZNF646O15015 1829 aaPredicted RBP21.73■■□□□ 1.07
CTCF-202ENST00000401394 CIB2O75838 187 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 GK3PQ14409 553 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 NBPF12Q5TAG4 269 aaPredicted RBP21.73■■□□□ 1.07
CTCF-202ENST00000401394 MTHFD1LQ6UB35 978 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 ZNF534Q76KX8 674 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 SATL1Q86VE3 508 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 SLC4A11Q8NBS3 891 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 STKLD1Q8NE28 680 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 RNPEPQ9H4A4 650 aa21.73■■□□□ 1.07
CTCF-202ENST00000401394 XAB2Q9HCS7 855 aaKnown RBP21.73■■□□□ 1.07
CTCF-202ENST00000401394 ADCY3O60266 1144 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 MAGEC1O60732 1142 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 KRT37O76014 449 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 APBA3O96018 575 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 OSBPP22059 807 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 ASPHQ12797 758 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 STX3Q13277 289 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 TAZQ16635 292 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 CASC4Q6P4E1 433 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 TTC13Q8NBP0 860 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 PCDH19Q8TAB3 1148 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 DNAJC1Q96KC8 554 aaKnown RBP21.72■■□□□ 1.07
CTCF-202ENST00000401394 ZNF214Q9UL59 606 aaPredicted RBP21.72■■□□□ 1.07
CTCF-202ENST00000401394 PYGLP06737 847 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 GHRHRQ02643 423 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 SLC10A2Q12908 348 aaPredicted RBP21.72■■□□□ 1.07
CTCF-202ENST00000401394 USP4Q13107 963 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 CCNIQ14094 377 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 TNS4Q8IZW8 715 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 ADAM32Q8TC27 787 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 NMD3Q96D46 503 aaKnown RBP21.72■■□□□ 1.07
CTCF-202ENST00000401394 HEXIM2Q96MH2 286 aaKnown RBP21.72■■□□□ 1.07
CTCF-202ENST00000401394 MMADHCQ9H3L0 296 aaPredicted RBP21.72■■□□□ 1.07
CTCF-202ENST00000401394 MINDY3Q9H8M7 445 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 PPCSQ9HAB8 311 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 ETNK2Q9NVF9 386 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 EMCNQ9ULC0 261 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 ABLIM1O14639 778 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 HCRTO43612 131 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 TBC1D12O60347 775 aa21.72■■□□□ 1.07
CTCF-202ENST00000401394 BPGMP07738 259 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms