RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 HBS1LQ9Y450 684 aaKnown RBP18.49■□□□□ 0.55
CTNS-203ENST00000399306 ZNF263O14978 683 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 MFAP3LO75121 409 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 CALB1P05937 261 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 CDC25BP30305 580 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 CDK17Q00537 523 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 OR6B2Q6IFH4 312 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 ACAD10Q6JQN1 1059 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 CC2D1AQ6P1N0 951 aaPredicted RBP18.48■□□□□ 0.55
CTNS-203ENST00000399306 FAM183BPQ6ZVS7 135 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 HTR3DQ70Z44 454 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 XYLT1Q86Y38 959 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 SLC30A5Q8TAD4 765 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 CLEC4CQ8WTT0 213 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 CPA5Q8WXQ8 436 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 FAM149B1Q96BN6 582 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 MSANTD3Q96H12 275 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 LRRC3BQ96PB8 259 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 FAM83CQ9BQN1 747 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 DCLK3Q9C098 648 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 SMG9Q9H0W8 520 aaKnown RBP18.48■□□□□ 0.55
CTNS-203ENST00000399306 ZNHIT6Q9NWK9 470 aaKnown RBP18.48■□□□□ 0.55
CTNS-203ENST00000399306 MARCH2Q9P0N8 246 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 ZNF510Q9Y2H8 683 aa18.48■□□□□ 0.55
CTNS-203ENST00000399306 SSU72P8A0A1W2PR75 194 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 AKR1B15C9JRZ8 316 aaPredicted RBP18.47■□□□□ 0.55
CTNS-203ENST00000399306 ARNTLO00327 626 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 PIK3R2O00459 728 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 TBX18O95935 607 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 FYNP06241 537 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 ZXDBP98169 803 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 SIGLEC14Q08ET2 396 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 PTP4A2Q12974 167 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 C1orf228Q6PIY5 440 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 HFE2Q6ZVN8 426 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 TMC6Q7Z403 805 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 OSCP1Q8WVF1 389 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 NDRG1Q92597 394 aaKnown RBP18.47■□□□□ 0.55
CTNS-203ENST00000399306 PLD4Q96BZ4 506 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 SMOC2Q9H3U7 446 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 BRD9Q9H8M2 597 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 ABHD10Q9NUJ1 306 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 TJP2Q9UDY2 1190 aa18.47■□□□□ 0.55
CTNS-203ENST00000399306 CAPN9O14815 690 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 DAB1O75553 588 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 LATS1O95835 1130 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 NCAM1P13591 858 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 GDI1P31150 447 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 GPC5P78333 572 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 RING1Q06587 406 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 MTA1Q13330 715 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 TRIP4Q15650 581 aaPredicted RBP18.46■□□□□ 0.55
CTNS-203ENST00000399306 TDRD12Q587J7 1177 aaKnown RBP18.46■□□□□ 0.55
CTNS-203ENST00000399306 MON1BQ7L1V2 547 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.46■□□□□ 0.55
CTNS-203ENST00000399306 KHSRPQ92945 711 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTNS-203ENST00000399306 SERPINB11Q96P15 392 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 SEPT11Q9NVA2 429 aaKnown RBP18.46■□□□□ 0.55
CTNS-203ENST00000399306 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 LSM7Q9UK45 103 aaKnown RBP18.46■□□□□ 0.55
CTNS-203ENST00000399306 SH3BP1Q9Y3L3 701 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 F5P12259 2224 aa18.46■□□□□ 0.55
CTNS-203ENST00000399306 TRIOO75962 3097 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 DDX3XO00571 662 aaKnown RBP eCLIP18.45■□□□□ 0.54
CTNS-203ENST00000399306 GREM1O60565 184 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 IGLV3-25P01717 112 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 NOS2P35228 1153 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 MATKP42679 507 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 PRKCQQ04759 706 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 EFEMP1Q12805 493 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
CTNS-203ENST00000399306 GRM2Q14416 872 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 WDR59Q6PJI9 974 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 RIN3Q8TB24 985 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 EDEM1Q92611 657 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 ATP2A3Q93084 1043 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 AZIN2Q96A70 460 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 TRIM11Q96F44 468 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 IRX2Q9BZI1 471 aaPredicted RBP18.45■□□□□ 0.54
CTNS-203ENST00000399306 ISCUQ9H1K1 167 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 GKN1Q9NS71 199 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 SMPD4Q9NXE4 827 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 CFAP97Q9P2B7 532 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 IMPACTQ9P2X3 320 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 RASAL2Q9UJF2 1139 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 COL4A2P08572 1712 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 TECTAO75443 2155 aa18.45■□□□□ 0.54
CTNS-203ENST00000399306 NARSO43776 548 aaKnown RBP18.44■□□□□ 0.54
CTNS-203ENST00000399306 RTN2O75298 545 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 STC2O76061 302 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 NFATC1O95644 943 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 SKILP12757 684 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 IFNAR2P48551 515 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 EIF4EBP2Q13542 120 aaPredicted RBP18.44■□□□□ 0.54
CTNS-203ENST00000399306 MMS22LQ6ZRQ5 1243 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 MCOLN2Q8IZK6 566 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 C3orf20Q8ND61 904 aa18.44■□□□□ 0.54
CTNS-203ENST00000399306 DQX1Q8TE96 717 aaKnown RBP18.44■□□□□ 0.54
CTNS-203ENST00000399306 NT5C3BQ969T7 300 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms