RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 AQP5P55064 265 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.27■□□□□ 0.84
COL13A1-205ENST00000398978 KCNN1Q92952 543 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 ZFATQ9P243 1243 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 APOL1O14791 398 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 LYPLA1O75608 230 aaPredicted RBP20.26■□□□□ 0.83
COL13A1-205ENST00000398978 RFPL1O75677 317 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 PGM1P36871 562 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 CXorf38Q8TB03 319 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 ZNF398Q8TD17 642 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 SHCBP1LQ9BZQ2 653 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 VPS33BQ9H267 617 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 IFT122Q9HBG6 1241 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 PCDH18Q9HCL0 1135 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 NVLO15381 856 aaKnown RBP20.26■□□□□ 0.83
COL13A1-205ENST00000398978 SNRPAP09012 282 aaKnown RBP20.26■□□□□ 0.83
COL13A1-205ENST00000398978 EDNRBP24530 442 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 SLC10A2Q12908 348 aaPredicted RBP20.26■□□□□ 0.83
COL13A1-205ENST00000398978 UBAP2LQ14157 1087 aaKnown RBP20.26■□□□□ 0.83
COL13A1-205ENST00000398978 CHSY1Q86X52 802 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 NUDCD3Q8IVD9 361 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 TEX9Q8N6V9 391 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 C7orf31Q8N865 590 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 E2F7Q96AV8 911 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 SYT15Q9BQS2 421 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 C2orf40Q9H1Z8 148 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 TXNRD2Q9NNW7 524 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 AKT3Q9Y243 479 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 PLLPQ9Y342 182 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
COL13A1-205ENST00000398978 IGKV6-21A0A0C4DH24 114 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 HMX2A2RU54 273 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 SLC15A5A6NIM6 579 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 SOCS7O14512 581 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 ATP6V1C1P21283 382 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 TFDP2Q14188 446 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 Q3C1V9 767 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 ZNF772Q68DY9 489 aaPredicted RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 SCG3Q8WXD2 468 aaKnown RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 FAM167AQ96KS9 214 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 RILPQ96NA2 401 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 FRMD8P1Q9BZ68 369 aaPredicted RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 PAK5Q9P286 719 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 I3L4J1 428 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 CHADO15335 359 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 PHKA2P46019 1235 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 CELF3Q5SZQ8 465 aaKnown RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 CASC4Q6P4E1 433 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 DHX35Q9H5Z1 703 aaKnown RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 KRT37O76014 449 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 ENDOD1O94919 500 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 PSMG1O95456 288 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 VDRP11473 427 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 GABRB2P47870 512 aa20.25■□□□□ 0.83
COL13A1-205ENST00000398978 MRPL45Q9BRJ2 306 aaKnown RBP20.25■□□□□ 0.83
COL13A1-205ENST00000398978 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
COL13A1-205ENST00000398978 TTC30AQ86WT1 665 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 RBM15BQ8NDT2 890 aaKnown RBP20.24■□□□□ 0.83
COL13A1-205ENST00000398978 TNFSF13BQ9Y275 285 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 GABBR2O75899 941 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 ARF4P18085 180 aaPredicted RBP20.24■□□□□ 0.83
COL13A1-205ENST00000398978 GLRA4Q5JXX5 417 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 TMEM154Q6P9G4 183 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 MOB2Q70IA6 237 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 RIOX2Q8IUF8 465 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 PYROXD2Q8N2H3 581 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 NDRG1Q92597 394 aaKnown RBP20.24■□□□□ 0.83
COL13A1-205ENST00000398978 OTUD5Q96G74 571 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 ZNF333Q96JL9 665 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 FGD4Q96M96 766 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 THTPAQ9BU02 230 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 KLC2Q9H0B6 622 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 PDZD7Q9H5P4 517 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 SSC5DA1L4H1 1573 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 SCN1AP35498 2009 aa20.24■□□□□ 0.83
COL13A1-205ENST00000398978 SYNJ2BP-COX16A0A087WUM0 186 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 APOEP02649 317 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 TXNP10599 105 aaKnown RBP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 RARBP10826 455 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 MXRA7P84157 204 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 TMEM62Q0P6H9 643 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 TMEM132DQ14C87 1099 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 CES3Q6UWW8 571 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 DENND5BQ6ZUT9 1274 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 APOL6Q9BWW8 343 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 PPP1R12CQ9BZL4 782 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 TMPRSS4Q9NRS4 437 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 COX16Q9P0S2 106 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 NME7Q9Y5B8 376 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 PRR5-ARHGAP8B1AHC4 643 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 INSRRP14616 1297 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 CYP2F1P24903 491 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 ARHGAP8P85298 464 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 TSNAXIP1Q2TAA8 658 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms