RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FAM151AQ8WW52 585 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 METTL21AQ8WXB1 218 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 CARD14Q9BXL6 1004 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 XPO4Q9C0E2 1151 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 VPS16Q9H269 839 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GOLPH3Q9H4A6 298 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 DBNDD1Q9H9R9 158 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 HMX1Q9NP08 348 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 DMAP1Q9NPF5 467 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 LZTFL1Q9NQ48 299 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ADAM22Q9P0K1 906 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 DBR1Q9UK59 544 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 ZNF236Q9UL36 1845 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GBF1Q92538 1859 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PNMA8CA0A1B0GUJ8 204 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 TMEM88BA6NKF7 163 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 HACD1B0YJ81 288 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 FAM220BPB1ANY3 271 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 CDH16O75309 829 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 RAD17O75943 681 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 AGR2O95994 175 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ZCCHC18P0CG32 403 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 UBE3AQ05086 875 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 TIMM50Q3ZCQ8 353 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 TFDP3Q5H9I0 405 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 FBXO42Q6P3S6 717 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 MAEAQ7L5Y9 396 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 R3HCC1LQ7Z5L2 792 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 ZBED8Q8IZ13 594 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 FAM98AQ8NCA5 519 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 OR6B3Q8NGW1 331 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GINS4Q9BRT9 223 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GPR63Q9BZJ6 419 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 NMRK2Q9NPI5 230 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 TBC1D13Q9NVG8 400 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GGA3Q9NZ52 723 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 APEX2Q9UBZ4 518 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 RAPGEFL1Q9UHV5 662 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PAPPA2Q9BXP8 1791 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 IRS2Q9Y4H2 1338 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 C15orf38-AP3S2A0A0A6YYH1 394 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 OPHN1O60890 802 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SPAG7O75391 227 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CYB5AP00167 134 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SKIV2L2P42285 1042 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 SMIM11AP58511 58 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 LGALS3BPQ08380 585 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TSNQ15631 228 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 HLFQ16534 295 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SETMARQ53H47 684 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 C10orf120Q5SQS8 335 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 C12orf60Q5U649 245 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 RESP18Q5W5W9 173 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ARPINQ7Z6K5 226 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 FAF2Q96CS3 445 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 HAVCR1Q96D42 359 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CHAMP1Q96JM3 812 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 EXOC2Q96KP1 924 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ORAI2Q96SN7 254 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ACE2Q9BYF1 805 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 MRPL46Q9H2W6 279 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 TMBIM4Q9HC24 238 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 POLMQ9NP87 494 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 ASAH2Q9NR71 780 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NDFIP2Q9NV92 336 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SUSD2Q9UGT4 822 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZFP69BQ9UJL9 534 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PADI2Q9Y2J8 665 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 WASHC1A8K0Z3 465 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 WASH3PC4AMC7 463 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 MATN2O00339 956 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 EEF1B2P24534 225 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 NDUFS1P28331 727 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NRLP54845 237 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 GALNT3Q14435 633 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 STAT4Q14765 748 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NDUFA9Q16795 377 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 FAM102AQ5T9C2 384 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 PCNX4Q63HM2 1172 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PTRHD1Q6GMV3 140 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 WASH2PQ6VEQ5 465 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 LRRC8DQ7L1W4 858 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TMEM110Q86TL2 294 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 AVENQ9NQS1 362 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 AASDHPPTQ9NRN7 309 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ARHGEF38Q9NXL2 777 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PAK5Q9P286 719 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 C19orf25Q9UFG5 118 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 FNDC3AQ9Y2H6 1198 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 PCDHB15Q9Y5E8 787 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 UBR3Q6ZT12 1888 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PRR23AA6NEV1 266 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TMX2-CTNND1H3BSU7 103 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TXNDC9O14530 226 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CD3EAPO15446 510 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 PEX1O43933 1283 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 OXSR1O95747 527 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 ALPPP05187 535 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 LYNP07948 512 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms